RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 TMC3Q7Z5M5 1100 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 VSTM4Q8IW00 320 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 CACNA2D3Q8IZS8 1091 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 GLYATL1Q969I3 302 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
LRRC28-213ENST00000559399 SRPK1Q96SB4 655 aaKnown RBP14.75□□□□□ -0.05
LRRC28-213ENST00000559399 CHP1Q99653 195 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 PRDM8Q9NQV8 689 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 KLC4Q9NSK0 619 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 STARD5Q9NSY2 213 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 DDX56Q9NY93 547 aaKnown RBP14.75□□□□□ -0.05
LRRC28-213ENST00000559399 SHROOM3Q8TF72 1996 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 A0A0A6YYK5 440 aaPredicted RBP14.74□□□□□ -0.05
LRRC28-213ENST00000559399 LILRA5A6NI73 299 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 NDST3O95803 873 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 UBE2IP63279 158 aaKnown RBP14.74□□□□□ -0.05
LRRC28-213ENST00000559399 MC2RQ01718 297 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 INSCQ1MX18 579 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 PLA2G4EQ3MJ16 856 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 FAM182AQ5T1J6 154 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 BZW1Q7L1Q6 419 aaKnown RBP14.74□□□□□ -0.05
LRRC28-213ENST00000559399 ADGRG6Q86SQ4 1221 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 SPATA22Q8NHS9 363 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 RTP4Q96DX8 246 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 TBC1D10AQ9BXI6 508 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 SLC12A9Q9BXP2 914 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 UCK1Q9HA47 277 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 GLOD4Q9HC38 313 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 KIF26BQ2KJY2 2108 aa14.74□□□□□ -0.05
LRRC28-213ENST00000559399 CHUKO15111 745 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 SPOPO43791 374 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 VEGFDO43915 354 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PMPCBO75439 489 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 MT-CYBP00156 380 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-213ENST00000559399 TNNT1P13805 278 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 BPIP17213 487 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 ITGB6P18564 788 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PTPN3P26045 913 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 NOP2P46087 812 aaKnown RBP14.73□□□□□ -0.05
LRRC28-213ENST00000559399 NR2C2P49116 596 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PRKD1Q15139 912 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-213ENST00000559399 TEX44Q53QW1 395 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 MFSD7Q6UXD7 560 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 CEACAM20Q6UY09 585 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 LRRTM4Q86VH4 590 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PLXDC1Q8IUK5 500 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 TRIM48Q8IWZ4 208 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 NLGN4XQ8N0W4 816 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 NLGN4YQ8NFZ3 816 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-213ENST00000559399 TFB1MQ8WVM0 346 aaKnown RBP14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PLEKHG4BQ96PX9 1271 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 CTRCQ99895 268 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 ZPBPQ9BS86 351 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 TIMM29Q9BSF4 260 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 KLHL3Q9UH77 587 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 PILRAQ9UKJ1 303 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 INTUQ9ULD6 942 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 HYOU1Q9Y4L1 999 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 SPO11Q9Y5K1 396 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 AHCTF1Q8WYP5 2266 aa14.73□□□□□ -0.05
LRRC28-213ENST00000559399 MN1Q10571 1320 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 ZNF891A8MT65 544 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 PDZK1P1A8MUH7 402 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 PYCARD-AS1I3L0S3 204 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 KMOO15229 486 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 CAPN5O15484 640 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 MTX2O75431 263 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 VIPP01282 170 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 ANKRD34CP0C6C1 535 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 COMTP21964 271 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 MAP4P27816 1152 aaKnown RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 CDKN2BP42772 138 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 TFDP2Q14188 446 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 CLCA4Q14CN2 919 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 TCEAL1Q15170 157 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 SEPT7Q16181 437 aaKnown RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 BORAQ6PGQ7 559 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 CNGA4Q8IV77 575 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 KIAA1143Q96AT1 154 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 TEKT5Q96M29 485 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 VPS35Q96QK1 796 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 CLMPQ9H6B4 373 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 GPN2Q9H9Y4 310 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 GEMIN8Q9NWZ8 242 aaKnown RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 UBP1Q9NZI7 540 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 SCHIP1Q9P0W5 487 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-213ENST00000559399 SLC23A2Q9UGH3 650 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 DNAJC16Q9Y2G8 782 aa14.72□□□□□ -0.05
LRRC28-213ENST00000559399 AURKAO14965 403 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 POLR1CO15160 346 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-213ENST00000559399 MTSS1O43312 755 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 PSTPIP1O43586 416 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 CST8O60676 142 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 PPFIA2O75334 1257 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 STK17BO94768 372 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 UBXN7O94888 489 aa14.71□□□□□ -0.05
LRRC28-213ENST00000559399 CDK14O94921 469 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms