RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 RPS3P23396 243 aaKnown RBP eCLIP17.89■□□□□ 0.45
CLPX-203ENST00000558958 FMO4P31512 558 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 NUDT1P36639 197 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 NSG1P42857 185 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 FNTBP49356 437 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 CSTF1Q05048 431 aaKnown RBP17.89■□□□□ 0.45
CLPX-203ENST00000558958 KHDC1Q4VXA5 237 aaKnown RBP17.89■□□□□ 0.45
CLPX-203ENST00000558958 SLC36A4Q6YBV0 504 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 HEATR4Q86WZ0 1026 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 DCLK2Q8N568 766 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 ACVR1CQ8NER5 493 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 HEXDCQ8WVB3 486 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 ARL8AQ96BM9 186 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 COX14Q96I36 57 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 HIC2Q96JB3 615 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 TEX101Q9BY14 249 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 FBXO4Q9UKT5 387 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 DMTF1Q9Y222 760 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 FAM95CA0A1B0GW59 222 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 METTL12A8MUP2 240 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 MTX2O75431 263 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ESR1P03372 595 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 KRT15P19012 456 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 AKT1P31749 480 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 AKT2P31751 481 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 POLD2P49005 469 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 CDK3Q00526 305 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 DNAJC3Q13217 504 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 RBM20Q5T481 1227 aaKnown RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 TIFABQ6ZNK6 161 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 CLDN19Q8N6F1 224 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 GOLGA6L1Q8N7Z2 621 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 GPATCH11Q8N954 259 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 NDNQ99608 321 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 MYOCQ99972 504 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 AARSD1Q9BTE6 412 aaKnown RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 CLPBQ9H078 707 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 WDR26Q9H7D7 661 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 PCDHB1Q9Y5F3 818 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 PRSS21Q9Y6M0 314 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 FOXO6A8MYZ6 492 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 CFAP99D6REC4 459 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 PRAMEF26H0Y7S4 382 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 FPGTO14772 594 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 RALBP11234 206 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ATP1B2P14415 290 aaPredicted RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 PKMP14618 531 aaKnown RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 MSH3P20585 1137 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 BCKDHBP21953 392 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 AVPR2P30518 371 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 POU4F1Q01851 419 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 RPL6Q02878 288 aaKnown RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 TMEM115Q12893 351 aaPredicted RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 CTSL3PQ5NE16 218 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ZNF648Q5T619 568 aaPredicted RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 HECTD2Q5U5R9 776 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 AGBL2Q5U5Z8 902 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 TRIM74Q86UV6 250 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 LONP2Q86WA8 852 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 TMEM145Q8NBT3 493 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ISL2Q96A47 359 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 DCUN1D1Q96GG9 259 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ELMO2Q96JJ3 720 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 ORAI3Q9BRQ5 295 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 LGR4Q9BXB1 951 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 STMN4Q9H169 189 aaPredicted RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 CCDC68Q9H2F9 335 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 SLC39A10Q9ULF5 831 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 VWA7Q9Y334 891 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 OR1A2Q9Y585 309 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 HS3ST3A1Q9Y663 406 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 COMMD10Q9Y6G5 202 aa17.88■□□□□ 0.45
CLPX-203ENST00000558958 OAS3Q9Y6K5 1087 aaKnown RBP17.88■□□□□ 0.45
CLPX-203ENST00000558958 EML5Q05BV3 1969 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 A0A1W2PPC4 97 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 A0A1W2PPM1 405 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 POM121BA6NF01 834 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 MAP3K13O43283 966 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 ALDOAP04075 364 aaKnown RBP17.87■□□□□ 0.45
CLPX-203ENST00000558958 ATP5DP30049 168 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 CLDN2P57739 230 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 USP10Q14694 798 aaKnown RBP17.87■□□□□ 0.45
CLPX-203ENST00000558958 TTMPQ5BVD1 217 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 FAM45BPQ6NSW5 357 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 MACC1Q6ZN28 852 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 TRABD2AQ86V40 505 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 SLC41A1Q8IVJ1 513 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 FAM45AQ8TCE6 357 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 NAT14Q8WUY8 206 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 FUBP1Q96AE4 644 aaKnown RBP17.87■□□□□ 0.45
CLPX-203ENST00000558958 BMFQ96LC9 184 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 APOOQ9BUR5 198 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 CAB39LQ9H9S4 337 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 TRIM39Q9HCM9 518 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 PHPT1Q9NRX4 125 aaPredicted RBP17.87■□□□□ 0.45
CLPX-203ENST00000558958 GNPTGQ9UJJ9 305 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 CA5BQ9Y2D0 317 aa17.87■□□□□ 0.45
CLPX-203ENST00000558958 MED16Q9Y2X0 877 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms