RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 TRIM56Q9BRZ2 755 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 ZSCAN5AQ9BUG6 496 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 CASS4Q9NQ75 786 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 KCNK6Q9Y257 313 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 JRKLQ9Y4A0 524 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
RABGGTA-207ENST00000558936 TRBV5-4A0A0C4DH59 114 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC78A2IDD5 438 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 B4DGG1 531 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 GRID2O43424 1007 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 SLC25A14O95258 325 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 IFNB1P01574 187 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ACP5P13686 325 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 LPOP22079 712 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 SPAM1P38567 509 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 CETN2P41208 172 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 TMEM115Q12893 351 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 SEMA3AQ14563 771 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 NR1D2Q14995 579 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 LONRF2Q1L5Z9 754 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 C14orf28Q4W4Y0 310 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ARHGEF18Q6ZSZ5 1173 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF761Q86XN6 746 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 CACTIN-AS1Q8N1I8 211 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ALS2CR12Q96Q35 445 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 NRTNQ99748 197 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 FSD1LQ9BXM9 530 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 PRDM8Q9NQV8 689 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 NCKIPSDQ9NZQ3 722 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF624Q9P2J8 865 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ATXN7L1Q9ULK2 861 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF148Q9UQR1 794 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ENTPD2Q9Y5L3 495 aa12.48□□□□□ -0.41
RABGGTA-207ENST00000558936 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 TMEM8BA6NDV4 472 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 TP73O15350 636 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 ASMTLO95671 621 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 HOXB3P14651 431 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 JUPP14923 745 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 ACTR1BP42025 376 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 OR1D5P58170 312 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 ACTR1AP61163 376 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 CRADDP78560 199 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 POU6F1Q14863 301 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 PLA2G4EQ3MJ16 856 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 CRTC3Q6UUV7 619 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 CREG2Q8IUH2 290 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 SFRP1Q8N474 314 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 DDHD1Q8NEL9 900 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF398Q8TD17 642 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 SLC37A2Q8TED4 501 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 CDKN2AIPNLQ96HQ2 116 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 FRMD8P1Q9BZ68 369 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 DPEP2Q9H4A9 486 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 RAB6BQ9NRW1 208 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 SMOXQ9NWM0 555 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 HACD3Q9P035 362 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNHIT2Q9UHR6 403 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 DOLKQ9UPQ8 538 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 PRSS21Q9Y6M0 314 aa12.47□□□□□ -0.41
RABGGTA-207ENST00000558936 IGLV3-16A0A075B6K0 115 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 H7C0S8 307 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 TMEM63AO94886 807 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 PRAMEF1O95521 474 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 PYGLP06737 847 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 IVDP26440 423 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ARNTP27540 789 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CD1CP29017 333 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CSF2RBP32927 897 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 COILP38432 576 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 PTGIRP43119 386 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 RPIAP49247 311 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ACVR1Q04771 509 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CYP4F3Q08477 520 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 KCNJ11Q14654 390 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ISXQ2M1V0 245 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms