RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PTRHD1Q6GMV3 140 aaKnown RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 EXOC3L1Q86VI1 746 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 SLC41A1Q8IVJ1 513 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 PNPLA1Q8N8W4 532 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 TP53I13Q8NBR0 393 aaPredicted RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 KLK6Q92876 244 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 LENG8Q96PV6 779 aaPredicted RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 NDNQ99608 321 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 PCED1AQ9H1Q7 454 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 P2RY12Q9H244 342 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 SNX15Q9NRS6 342 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 TMPRSS11EQ9UL52 423 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 VWA7Q9Y334 891 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 TRPM6Q9BX84 2022 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 A0A1W2PPM1 405 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 E5RI56 91 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 INPP4BO15327 924 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 LATO43561 262 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 VPS26AO75436 327 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 RFPL1O75677 317 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 AP2A2O94973 939 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 ATP1B2P14415 290 aaPredicted RBP16.69■□□□□ 0.26
SNX1-203ENST00000558040 KRT4P19013 534 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 HNRNPA2B1P22626 353 aaKnown RBP16.69■□□□□ 0.26
SNX1-203ENST00000558040 CA5AP35218 305 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 MAGEA12P43365 314 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
SNX1-203ENST00000558040 RAB10P61026 200 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 USP39Q53GS9 565 aaKnown RBP16.69■□□□□ 0.26
SNX1-203ENST00000558040 UGT3A1Q6NUS8 523 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 RAPH1Q70E73 1250 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 KCNJ9Q92806 393 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 CENPTQ96BT3 561 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 HIC2Q96JB3 615 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 SERAC1Q96JX3 654 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 BIRC8Q96P09 236 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 BOCQ9BWV1 1114 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 TSSK1BQ9BXA7 367 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 GPR174Q9BXC1 333 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 WDR26Q9H7D7 661 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 CAB39LQ9H9S4 337 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 SSU72Q9NP77 194 aaKnown RBP16.69■□□□□ 0.26
SNX1-203ENST00000558040 TAS2R13Q9NYV9 303 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 TLK1Q9UKI8 766 aa16.69■□□□□ 0.26
SNX1-203ENST00000558040 CCDC163A0A0D9SF12 145 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 K7ESM1 405 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 SLC31A1O15431 190 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 LAMTOR5O43504 91 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 RHOBTB1O94844 696 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 FSBPO95073 299 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 OR56A5P0C7T3 313 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 PYGBP11216 843 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 BRAFP15056 766 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 CD9P21926 228 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 FDXRP22570 491 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 AKT2P31751 481 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 CCNFP41002 786 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 GTF2H3Q13889 308 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 INPP5AQ14642 412 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 CTSL3PQ5NE16 218 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 MACC1Q6ZN28 852 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 HEATR4Q86WZ0 1026 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 PLA2G15Q8NCC3 412 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 RLN3Q8WXF3 142 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 C6orf106Q9H6K1 298 aaPredicted RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 POPDC3Q9HBV1 291 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 PRMT8Q9NR22 394 aaPredicted RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 MBNL1Q9NR56 388 aaKnown RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 PCMTD2Q9NV79 361 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 FAM53CQ9NYF3 392 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 CNOT6Q9ULM6 557 aaKnown RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
SNX1-203ENST00000558040 DMTF1Q9Y222 760 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 ANKRD6Q9Y2G4 727 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 PLXNB3Q9ULL4 1909 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 COL6A3P12111 3177 aa16.68■□□□□ 0.26
SNX1-203ENST00000558040 A0A087X1B8 175 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 A0A096LPK6 155 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 FOXO6A8MYZ6 492 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 C10orf142B7Z368 130 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 GOLGA8RI6L899 631 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 FPGTO14772 594 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 VEGFDO43915 354 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 HPDP32754 393 aaPredicted RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 IGFALSP35858 605 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 TRIM23P36406 574 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
SNX1-203ENST00000558040 CDKN2DP55273 166 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 TAS2R39P59534 338 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 CDK3Q00526 305 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 B4GALNT1Q00973 533 aa16.67■□□□□ 0.26
SNX1-203ENST00000558040 SLC18A2Q05940 514 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms