RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 HUNKP57058 714 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 DNAJB13P59910 316 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 PSMD5Q16401 504 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 C6orf183Q5T699 404 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 KIAA0930Q6ICG6 404 aaPredicted RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 PHACTR4Q8IZ21 702 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 DTWD1Q8N5C7 304 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 VAT1Q99536 393 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 HEPHQ9BQS7 1158 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 TDRD1Q9BXT4 1180 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 TOR3AQ9H497 397 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CNGB3Q9NQW8 809 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 OSER1Q9NX31 292 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ACTR3BQ9P1U1 418 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 EIF2B4Q9UI10 523 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 ZNF225Q9UK10 706 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 FFAR3O14843 346 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MUSKO15146 869 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 GPR42O15529 346 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CAPN15O75808 1086 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 C1QCP02747 245 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CNPP09543 421 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 GRIK1P39086 918 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 KPNA2P52292 529 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 TIAL1Q01085 375 aaKnown RBP eCLIP12.24□□□□□ -0.45
LDLR-205ENST00000557933 SREBF2Q12772 1141 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 NKG7Q16617 165 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 KYAT1Q16773 422 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 DDR2Q16832 855 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 FAM117BQ6P1L5 589 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 PHYKPLQ8IUZ5 450 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 HPS1Q92902 700 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MYEOVQ96EZ4 313 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 IL12RB2Q99665 862 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 NOL6Q9H6R4 1146 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 ENTPD7Q9NQZ7 604 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 HS3ST4Q9Y661 456 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ASB14A6NK59 587 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 E9PAM4 449 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ARVCFO00192 962 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 GNGT2O14610 69 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MITFO75030 526 aaPredicted RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 GSNP06396 782 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MYL3P08590 195 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 WARSP23381 471 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 DCKP27707 260 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ACVRL1P37023 503 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MTHFRP42898 656 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MAP2K4P45985 399 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 TM4SF4P48230 202 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 PSMD8P48556 350 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 TMED10P49755 219 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 GSTM4Q03013 218 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 SCAPQ12770 1279 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 PTGR1Q14914 329 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 RGS21Q2M5E4 152 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 XAF1Q6GPH4 301 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 SYVN1Q86TM6 617 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 OR10T2Q8NGX3 314 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ZFP90Q8TF47 636 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 SP110Q9HB58 689 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 NTN4Q9HB63 628 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 ZFP14Q9HCL3 533 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 MRPL40Q9NQ50 206 aaKnown RBP12.24□□□□□ -0.45
LDLR-205ENST00000557933 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
LDLR-205ENST00000557933 RBM47A0AV96 593 aaKnown RBP12.23□□□□□ -0.45
LDLR-205ENST00000557933 GUCA1CO95843 209 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 CYBBP04839 570 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 SLC2A3P11169 496 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 CCNCP24863 283 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 HTR1BP28222 390 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 SCNN1AP37088 669 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 VBP1P61758 197 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 IFITM3Q01628 133 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 INTS11Q5TA45 600 aaKnown RBP12.23□□□□□ -0.45
LDLR-205ENST00000557933 PM20D1Q6GTS8 502 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 CRTC3Q6UUV7 619 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 CROCCP3Q8IVE0 287 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 DCP1BQ8IZD4 617 aaKnown RBP12.23□□□□□ -0.45
LDLR-205ENST00000557933 SLC22A15Q8IZD6 547 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 NDNFQ8TB73 568 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 KCTD13Q8WZ19 329 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 IRGQQ8WZA9 623 aa12.23□□□□□ -0.45
LDLR-205ENST00000557933 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms