RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RBM43Q6ZSC3 357 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 TOM1L2Q6ZVM7 507 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PHLDB2Q86SQ0 1253 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SERPINA11Q86U17 422 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TLK2Q86UE8 772 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 CCDC190Q86UF4 302 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TRIM74Q86UV6 250 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 TRIM73Q86UV7 250 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 ZNF595Q8IYB9 648 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 KDM8Q8N371 416 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PARP16Q8N5Y8 322 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 EXD1Q8NHP7 514 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 NCOA7Q8NI08 942 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 OCC1Q8TAD7 63 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 URGCPQ8TCY9 931 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 HEXDCQ8WVB3 486 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PIGKQ92643 395 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SNAPC3Q92966 411 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 CHFRQ96EP1 664 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MYEOVQ96EZ4 313 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 ACOX2Q99424 681 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 NT5C3AQ9H0P0 336 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 RWDD1Q9H446 243 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 FN3KQ9H479 309 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MAGIXQ9H6Y5 334 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MINDY3Q9H8M7 445 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 RNPEPL1Q9HAU8 725 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SYTL2Q9HCH5 934 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 ZNF304Q9HCX3 659 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 PRMT7Q9NVM4 692 aaPredicted RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 ASIC5Q9NY37 505 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 SPG21Q9NZD8 308 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 DKK2Q9UBU2 259 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 OR14J1Q9UGF5 321 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 FBXL5Q9UKA1 691 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 EXOC7Q9UPT5 735 aa3.78□□□□□ -1.8
TDP1-217ENST00000557782 OAS3Q9Y6K5 1087 aaKnown RBP3.78□□□□□ -1.8
TDP1-217ENST00000557782 ZNF541Q9H0D2 1346 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CYP2D7A0A087X1C5 515 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TRBV2A0A0J9YWF9 115 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 DDTLA6NHG4 134 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 TMEM200CA6NKL6 621 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 RASGRF2O14827 1237 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 MCF2LO15068 1137 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ST8SIA3O43173 380 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 FAM20BO75063 409 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 MED24O75448 989 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SLC16A8O95907 504 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 IFNB1P01574 187 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ICAM1P05362 532 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ABHD2P08910 425 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 C8orf89P0DMQ9 161 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ETS1P14921 441 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ST6GAL1P15907 406 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 VCLP18206 1134 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CD58P19256 250 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ACAT1P24752 427 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 ITGB8P26012 769 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CD27P26842 260 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 CHATP28329 748 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TACR3P29371 465 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ADSSP30520 456 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ADRA1BP35368 520 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 WNT5AP41221 380 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ASMTP46597 345 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ADARP55265 1226 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 KCNJ10P78508 379 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 PPP2R2BQ00005 443 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TOB2Q14106 344 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 GAMTQ14353 236 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TRADDQ15628 312 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SGCBQ16585 318 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 AARDQ4LEZ3 155 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 IFI44LQ53G44 452 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 HS1BP3Q53T59 392 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ALG10Q5BKT4 473 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ALG10BQ5I7T1 473 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 KCNT1Q5JUK3 1230 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 KIAA1755Q5JYT7 1200 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SPOUT1Q5T280 376 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 KIAA0895LQ68EN5 471 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SIGIRRQ6IA17 410 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 PAPD4Q6PIY7 484 aaKnown RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 NAPRTQ6XQN6 538 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
TDP1-217ENST00000557782 TRILQ7L0X0 811 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SLC29A4Q7RTT9 530 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TFAP2DQ7Z6R9 452 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 ZER1Q7Z7L7 766 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 TMEM110Q86TL2 294 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 EXOC3L1Q86VI1 746 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SIAH3Q8IW03 269 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 DENND6AQ8IWF6 608 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 POU5F2Q8N7G0 328 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 SCCPDHQ8NBX0 429 aa3.77□□□□□ -1.81
TDP1-217ENST00000557782 GMCL1P1Q8NEA9 526 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms