RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 EEF1DP29692 281 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 BCAP31P51572 246 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 BMXP51813 675 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ARSFP54793 590 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 NEDD8Q15843 81 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 RGS21Q2M5E4 152 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ANKDD1AQ495B1 522 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 NANOGP8Q6NSW7 305 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 THAP5Q7Z6K1 395 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 CENPSQ8N2Z9 138 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 CHCHD4Q8N4Q1 142 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 EXT2Q93063 718 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 BCL7BQ9BQE9 202 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ING2Q9H160 280 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 NANOGQ9H9S0 305 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 RNF112Q9ULX5 631 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 CRYL1Q9Y2S2 319 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 PCDHGA11Q9Y5H2 935 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 MIA3Q5JRA6 1907 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CFAP99D6REC4 459 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 DYNC1LI2O43237 492 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-232ENST00000557487 TREHO43280 583 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 SULT1C4O75897 302 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CLIC3O95833 236 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 SLC4A1P02730 911 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 RAP2AP10114 183 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 THRBP10828 461 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CHRM3P20309 590 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 TIAL1Q01085 375 aaKnown RBP eCLIP16.16■□□□□ 0.187e-9■■□□□ 13.1
SHMT2-232ENST00000557487 RAD51Q06609 339 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 BNIP3Q12983 259 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 ARHGEF6Q15052 776 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 FAM110CQ1W6H9 321 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 FAM98BQ52LJ0 330 aaKnown RBP16.16■□□□□ 0.18
SHMT2-232ENST00000557487 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 RABL3Q5HYI8 236 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 FRA10AC1Q70Z53 315 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 RYBPQ8N488 228 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CASP10Q92851 521 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 ZYG11BQ9C0D3 744 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
SHMT2-232ENST00000557487 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CATSPERZQ9NTU4 200 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 FAM105AQ9NUU6 356 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 GIN1Q9NXP7 522 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 TAS2R13Q9NYV9 303 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.16■□□□□ 0.185e-12■■□□□ 11.4
SHMT2-232ENST00000557487 ERGIC3Q9Y282 383 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 PTGDR2Q9Y5Y4 395 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 CASP8AP2Q9UKL3 1982 aa16.16■□□□□ 0.18
SHMT2-232ENST00000557487 ASPDHA6ND91 283 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 SUPT3HB4E1H0 165 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 ARNTLO00327 626 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 SUPT3HO75486 399 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GOT2P00505 430 aaKnown RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GNRH1P01148 92 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 EEF1B2P24534 225 aaKnown RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 ZFP36L2P47974 494 aaKnown RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 STC1P52823 247 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 DIO3P55073 304 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 DSC2Q02487 901 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 IL10RBQ08334 325 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 TRAF2Q12933 501 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 PRKG2Q13237 762 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 UPP1Q16831 310 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 XKR5Q6UX68 686 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 LDB1Q86U70 411 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 IFNEQ86WN2 208 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 KIAA2013Q8IYS2 634 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 C8orf59Q8N0T1 100 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 THEM5Q8N1Q8 247 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 TTC30BQ8N4P2 665 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 NKAPQ8N5F7 415 aaKnown RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 ARRDC2Q8TBH0 407 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 BRSK1Q8TDC3 778 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 ISG20Q96AZ6 181 aaKnown RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 SDCCAG3Q96C92 435 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 TBATAQ96M53 351 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GAD1Q99259 594 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 COMMD8Q9NX08 183 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 MPP6Q9NZW5 540 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 UXTQ9UBK9 157 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GIMAP2Q9UG22 337 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 BTRCQ9Y297 605 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 PATJQ8NI35 1801 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 CCDC162PA2VCL2 907 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GMNNO75496 209 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 C1RP00736 705 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 ALPLP05186 524 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 IGFBP6P24592 240 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-232ENST00000557487 HRH2P25021 359 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GRIK1P39086 918 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 PBX3P40426 434 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 SLC10A7Q0GE19 358 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
SHMT2-232ENST00000557487 GLYATQ6IB77 296 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms