RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 UGT1A9O60656 530 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 KCNJ13O60928 360 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 MTX2O75431 263 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 TCEA3O75764 348 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 MT-CO3P00414 261 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 ACP5P13686 325 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 VCLP18206 1134 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A6P19224 532 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 MSH3P20585 1137 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 ITGALP20701 1170 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A1P22309 533 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A4P22310 534 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A3P35503 534 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A5P35504 534 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 XIAPP98170 497 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CDK16Q00536 496 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 NFATC2Q13469 925 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 POU6F1Q14863 301 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 INSCQ1MX18 579 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 SKIDA1Q1XH10 827 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 GPR33Q49SQ1 333 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 GRK7Q8WTQ7 553 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 HEXDCQ8WVB3 486 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 GATA6Q92908 595 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 RANBP9Q96S59 729 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
SLIRP-209ENST00000557342 DNMT3AQ9Y6K1 912 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-209ENST00000557342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 FAM149AA5PLN7 773 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 MROH6A6NGR9 719 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 PHF2O75151 1096 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 ECEL1O95672 775 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 KRT14P02533 472 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 RALBP11234 206 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 ADRA1DP25100 572 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 AKT1P31749 480 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 MC4RP32245 332 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 FNTAP49354 379 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 SARNPP82979 210 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 SPIDRQ14159 915 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 RBM44Q6ZP01 1051 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 NLRP9Q7RTR0 991 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 NAGSQ8N159 534 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 ARL14Q8N4G2 192 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 AVL9Q8NBF6 648 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 GRAMD1AQ96CP6 724 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 DCUN1D1Q96GG9 259 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 PIH1D1Q9NWS0 290 aaKnown RBP12.32□□□□□ -0.44
SLIRP-209ENST00000557342 RIMKLBQ9ULI2 386 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 KCNK6Q9Y257 313 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 RNF215Q9Y6U7 377 aa12.32□□□□□ -0.44
SLIRP-209ENST00000557342 PIKFYVEQ9Y2I7 2098 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 CFAP99D6REC4 459 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 ZNF185O15231 689 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 F3P13726 295 aa12.31□□□□□ -0.44
SLIRP-209ENST00000557342 TPSB2P20231 275 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms