RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC34A2O95436 690 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 FBXL19Q6PCT2 694 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SLC16A9Q7RTY1 509 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ZNF283Q8N7M2 679 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DAGLBQ8NCG7 672 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 OR4A15Q8NGL6 344 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 OR10A4Q9H209 315 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DDX43Q9NXZ2 648 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 OR6C6A6NF89 314 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 LHCGRP22888 699 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SLC15A1P46059 708 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ABRAXAS2Q15018 415 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CCNYL2Q5T2Q4 361 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 UNQ6126/PRO20091Q6UXV3 157 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TRAPPC5Q8IUR0 188 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ARHGAP12Q8IWW6 846 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PHC2Q8IXK0 858 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 FTMTQ8N4E7 242 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 POU5F2Q8N7G0 328 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 AGAP11Q8TF27 550 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TNKS2Q9H2K2 1166 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 KAT8Q9H7Z6 458 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 TRIM36Q9NQ86 728 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 RUVBL1Q9Y265 456 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 CCDC88AQ3V6T2 1871 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 H3BM21 787 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CLDN4O14493 209 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PLD2O14939 933 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DNAJB5O75953 348 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PGAM2P15259 253 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SLC30A10Q6XR72 485 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 KIF18BQ86Y91 864 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CNTD1Q8N815 330 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TMEM9Q9P0T7 183 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PCYOX1Q9UHG3 505 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 FRMPD4Q14CM0 1322 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 A0A087WWV3 80 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 A0A1W2PQ67 120 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 GSC2O15499 205 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 MICAL2O94851 1124 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 JCHAINP01591 159 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 KIR3DL1P43629 444 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 AENQ8WTP8 325 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 GTF2IRD1Q9UHL9 959 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 FAM234BA2RU67 622 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 MAGEA3P43357 314 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PTPN20Q4JDL3 420 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 USP30Q70CQ3 517 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PHF24Q9UPV7 400 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 RAB19A4D1S5 217 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 FBXO47Q5MNV8 452 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 NEPROQ6NW34 567 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TMEM86AQ8N2M4 240 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 MAGI2Q86UL8 1455 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CYP27B1O15528 508 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 LATS1O95835 1130 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 IFNA17P01571 189 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 HK1P19367 917 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ECT2LQ008S8 904 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 RPL6Q02878 288 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 C7orf57Q8NEG2 295 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TATDN2Q93075 761 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 MALSU1Q96EH3 234 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SPACA7Q96KW9 195 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 IFT27Q9BW83 186 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ZNF510Q9Y2H8 683 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PZPP20742 1482 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ANKRD33BA6NCL7 494 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TPP1O14773 563 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PRKCDQ05655 676 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CCDC106Q9BWC9 280 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 ATMINO43313 823 aaPredicted RBP8.77□□□□□ -1
SYNE3-205ENST00000557275 ARL6IP5O75915 188 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 COL6A2P12110 1019 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 ZNF823P16415 610 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 GSTM3P21266 225 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 RPL10P27635 214 aaKnown RBP8.77□□□□□ -1
SYNE3-205ENST00000557275 GBX2P52951 348 aaPredicted RBP8.77□□□□□ -1
SYNE3-205ENST00000557275 SPOCK1Q08629 439 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 MPZL3Q6UWV2 235 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 MFSD8Q8NHS3 518 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 PNPLA2Q96AD5 504 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 CERS2Q96G23 380 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 TMEM176AQ96HP8 235 aa8.77□□□□□ -1
SYNE3-205ENST00000557275 C1QTNF3-AMACRE9PGA6 284 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 NMT2O60551 498 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 HRGP04196 525 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 FGF1P05230 155 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 PLEKP08567 350 aaPredicted RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GNG2P59768 71 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 CRY2Q49AN0 593 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GPRC6AQ5T6X5 926 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 LRRC38Q5VT99 294 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 GLT1D1Q96MS3 346 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 TRPM1Q7Z4N2 1603 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 MED14O60244 1454 aa8.77□□□□□ -1.01
SYNE3-205ENST00000557275 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1.01
SYNE3-205ENST00000557275 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms