RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 RFFLQ8WZ73 363 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF599Q96NL3 588 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 BOCQ9BWV1 1114 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 THAP2Q9H0W7 228 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ATP13A3Q9H7F0 1226 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 SP110Q9HB58 689 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 USP29Q9HBJ7 922 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 DNAJC28Q9NX36 388 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 NLGN3Q9NZ94 848 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 IFNKQ9P0W0 207 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 AKAP13Q12802 2813 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 MAP1BP46821 2468 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 A0A087X0T9 212 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 A0A1W2PQ67 120 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 SHISA3A0PJX4 238 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 TMEM110-MUSTN1A8MSY1 372 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 MYO1FO00160 1098 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 DFFAO00273 331 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 TPP1O14773 563 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 BUB1BO60566 1050 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 GYPCP04921 128 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 CYP1A2P05177 515 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 FAM228BP0C875 321 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 CKMT1AP12532 417 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 IL1R2P27930 398 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 SERPINA4P29622 427 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 GRK3P35626 688 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 PEX5P50542 639 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 DUSP3P51452 185 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 THOP1P52888 689 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 FOXD4Q12950 439 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 PDE1CQ14123 709 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF267Q14586 743 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 PDCD1Q15116 288 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 CCDC122Q5T0U0 273 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 ALKBH5Q6P6C2 394 aaKnown RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 TMCO3Q6UWJ1 677 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 POLNQ7Z5Q5 900 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF655Q8N720 491 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 NPWQ8N729 165 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 NETO2Q8NC67 525 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 ECHDC3Q96DC8 303 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 TBATAQ96M53 351 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 PSKH2Q96QS6 385 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 CINPQ9BW66 212 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 UCKL1Q9NWZ5 548 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 NCKIPSDQ9NZQ3 722 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 LUZP4Q9P127 313 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 RCOR3Q9P2K3 495 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 LCMT1Q9UIC8 334 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 ITM2BQ9Y287 266 aa9.86□□□□□ -0.83
HNRNPC-228ENST00000557033 EPG5Q9HCE0 2579 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 FAM149AA5PLN7 773 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 K7ESM1 405 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 DVL2O14641 736 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 PIGNO95427 931 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 GP1BAP07359 652 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 PAMP19021 973 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 AMPD1P23109 780 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 TPP2P29144 1249 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 CASP14P31944 242 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 HSPA9P38646 679 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 BLKP51451 505 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 AP1S1P61966 158 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 BCL2L1Q07817 233 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 HADHQ16836 314 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF542PQ5EBM4 170 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 SEZ6L2Q6UXD5 910 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 CAMK1DQ8IU85 385 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 LRRC49Q8IUZ0 686 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 BBS5Q8N3I7 341 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 PAF1Q8N7H5 531 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 TP53I13Q8NBR0 393 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 FAM71BQ8TC56 605 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 HSPH1Q92598 858 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 APOLD1Q96LR9 279 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 CSPG4P5Q96PW8 444 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 WRAP53Q9BUR4 548 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 NUP85Q9BW27 656 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 MS4A5Q9H3V2 200 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 CCM2LQ9NUG4 571 aaPredicted RBP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 SPASTQ9UBP0 616 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 ANAPC7Q9UJX3 599 aa9.85□□□□□ -0.83
HNRNPC-228ENST00000557033 CEP295Q9C0D2 2601 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF561-AS1K7EIQ3 104 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 FFAR2O15552 330 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 AQP9O43315 295 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 MAFKO60675 156 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 PEX11BO96011 259 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 HRGP04196 525 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 C6P13671 934 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 TYRP1P17643 537 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 IL4RP24394 825 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 NFKBIAP25963 317 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 HTR1BP28222 390 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SERPINB6P35237 376 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms