RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 C11orf49Q9H6J7 331 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 LRRC40Q9H9A6 602 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 NMUR1Q9HB89 426 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ANLNQ9NQW6 1124 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.51□□□□□ -1.69
SRP54-212ENST00000556992 HAUS2Q9NVX0 235 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 MARCH5Q9NX47 278 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 EURLQ9NYK6 297 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SPG21Q9NZD8 308 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 KLHL8Q9P2G9 620 aaPredicted RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 MTRRQ9UBK8 725 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 AFF4Q9UHB7 1163 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 TBK1Q9UHD2 729 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 RSPH14Q9UHP6 348 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ZNF180Q9UJW8 692 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TBX21Q9UL17 535 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SSX2IPQ9Y2D8 614 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ATP11BQ9Y2G3 1177 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 HBS1LQ9Y450 684 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 CDY1Q9Y6F8 540 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 KIAA1217Q5T5P2 1943 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CLUHO75153 1309 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 IGLV3-10A0A075B6K4 115 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 GOLGA6L7A0A1B0GV03 622 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 UBA6A0AVT1 1052 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 MTMR11A4FU01 709 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ZNF840PA6NDX5 716 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ARHGAP42A6NI28 874 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NT5C1B-RDH14C9J2C7 533 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 E9PAM4 449 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 I6L893 689 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 KCNK1O00180 336 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 DFFAO00273 331 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TM9SF1O15321 606 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MFSD11O43934 449 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CACNG3O60359 315 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NEBLO76041 1014 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 BAIAP3O94812 1187 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 IPO13O94829 963 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 ABLIM3O94929 683 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ZWINTO95229 277 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 AP2A1O95782 977 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 VIMP08670 466 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 CSH1P0DML2 217 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CSH2P0DML3 217 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 LAG3P18627 525 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 DRD4P21917 467 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PTX3P26022 381 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 GCAP28676 217 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ELF1P32519 619 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PPM1AP35813 382 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CCT5P48643 541 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PTH2RP49190 550 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 HARS2P49590 506 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 PGFP49763 221 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 GATMP50440 423 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PAPOLAP51003 745 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 YBEYP58557 167 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 DSG1Q02413 1049 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 HNRNPDQ14103 355 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 SPIDRQ14159 915 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 BTG3Q14201 252 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 SPARCL1Q14515 664 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MYBPC3Q14896 1274 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 VEPH1Q14D04 833 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TMED2Q15363 201 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PSMD5Q16401 504 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TCTN1Q2MV58 587 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 KBTBD12Q3ZCT8 623 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PARP15Q460N3 678 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PABPC1LQ4VXU2 614 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 TIGD2Q4W5G0 525 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 SPANXN3Q5MJ09 141 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 HECTD3Q5T447 861 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 UBAP2Q5T6F2 1119 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 FAXCQ5TGI0 409 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MANEALQ5VSG8 457 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 HHATQ5VTY9 493 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 SDHAF4Q5VUM1 108 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 AFMIDQ63HM1 303 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 STEAP4Q687X5 459 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NAPEPLDQ6IQ20 393 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CASC4Q6P4E1 433 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TIFABQ6ZNK6 161 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NECAB2Q7Z6G3 386 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PIGWQ7Z7B1 504 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CTAGE3PQ8IX95 158 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CMTR2Q8IYT2 770 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 CMTM4Q8IZR5 234 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ATPAF2Q8N5M1 289 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CCDC33Q8N5R6 958 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PPM1NQ8N819 430 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 RTL3Q8N8U3 475 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 DNAAF3Q8N9W5 541 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 GSDMBQ8TAX9 411 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ZNF473Q8WTR7 871 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 THAP3Q8WTV1 239 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 DCAKDQ8WVC6 231 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CKAP2Q8WWK9 683 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms