RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PIH1D2Q8WWB5 315 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 RSC1A1Q92681 617 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 C19orf60Q96EN9 201 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 RMI1Q9H9A7 625 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 UCK1Q9HA47 277 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 MLXIPLQ9NP71 852 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ZNF185O15231 689 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 CAPZBP47756 277 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ARL4DP49703 201 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 KLK7P49862 253 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 KCNAB1Q14722 419 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 INSCQ1MX18 579 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 TDRD12Q587J7 1177 aaKnown RBP13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
ACTN1-219ENST00000556432 NLRP8Q86W28 1048 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 MR1Q95460 341 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 PNPLA2Q96AD5 504 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 AKIRIN1Q9H9L7 192 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-219ENST00000556432 ARFGAP3Q9NP61 516 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 NT5MQ9NPB1 228 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 SCHIP1Q9P0W5 487 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-219ENST00000556432 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 PPIL1Q9Y3C6 166 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
ACTN1-219ENST00000556432 A0A0J9YYE9 177 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 ANKUB1A6NFN9 424 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 H3BRJ5 948 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 RNF8O76064 485 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CLDN7O95471 211 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 TRBC1P01850 177 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 NELFEP18615 380 aaKnown RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 JAM2P57087 298 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CDK18Q07002 472 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 RAPSNQ13702 412 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 DPYSQ14117 519 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 TMCO3Q6UWJ1 677 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 HPS6Q86YV9 775 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 OR2AG1Q9H205 316 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CARD9Q9H257 536 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CWC15Q9P013 229 aaKnown RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 FARSAQ9Y285 508 aaKnown RBP13.71□□□□□ -0.21
ACTN1-219ENST00000556432 TTLL3Q9Y4R7 772 aa13.71□□□□□ -0.21
ACTN1-219ENST00000556432 OTOGQ6ZRI0 2925 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 C1orf232A0A0U1RR37 186 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 FADS2P1A8MWK0 482 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 EPHB6O15197 1021 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 NUAK1O60285 661 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 PEX11BO96011 259 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 TPM2P07951 284 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 FOLR1P15328 257 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF8P17098 575 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 ARL4AP40617 200 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 SLC19A1P41440 591 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 KYNUQ16719 465 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 ZNF648Q5T619 568 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 TMEM126BQ8IUX1 230 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 AOPEPQ8N6M6 819 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 RBMXL3Q8N7X1 1067 aaKnown RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 LPCAT1Q8NF37 534 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 SNRNP40Q96DI7 357 aaKnown RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 MLPHQ9BV36 600 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-219ENST00000556432 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 FAM83DQ9H4H8 585 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 ASF1BQ9NVP2 202 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 GPR83Q9NYM4 423 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 PKD2L2Q9NZM6 624 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 ATXN10Q9UBB4 475 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 CHKBQ9Y259 395 aa13.7□□□□□ -0.22
ACTN1-219ENST00000556432 F8P00451 2351 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 CSMD1Q96PZ7 3565 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
ACTN1-219ENST00000556432 F5H423 210 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-219ENST00000556432 ATMINO43313 823 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms