RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 C1orf210Q8IVY1 113 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PIANPQ8IYJ0 282 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 DCLK2Q8N568 766 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 DDHD1Q8NEL9 900 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 LPGAT1Q92604 370 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 SKA1Q96BD8 255 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GPR22Q99680 433 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 AARSD1Q9BTE6 412 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GPR174Q9BXC1 333 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 TPSD1Q9BZJ3 242 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 EPHX3Q9H6B9 360 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 WDR26Q9H7D7 661 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 POPDC3Q9HBV1 291 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 TRIM39Q9HCM9 518 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 DLGAP2Q9P1A6 1054 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 FBXO4Q9UKT5 387 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 SLC39A10Q9ULF5 831 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 SMG5Q9UPR3 1016 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ZFR2Q9UPR6 939 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ANKRD6Q9Y2G4 727 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PSAT1Q9Y617 370 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 COL6A3P12111 3177 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 ANKRD36A6QL64 1941 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 KLHL33A6NCF5 533 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 MEI4A8MW99 385 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 K7ESF4 209 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 GAPDHSO14556 408 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 LATO43561 262 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 CDK14O94921 469 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 PDGFBP01127 241 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 COL6A2P12110 1019 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 GM2AP17900 193 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 GABRB3P28472 473 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 CNR2P34972 360 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 CDKN1CP49918 316 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 RAB10P61026 200 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 MAGOHP61326 146 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 YPEL5P62699 121 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 RPL6Q02878 288 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 TMEM115Q12893 351 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 PTK2BQ14289 1009 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 SEMA3AQ14563 771 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 INPP5AQ14642 412 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 IRF4Q15306 451 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 WDR45BQ5MNZ6 344 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 KLC3Q6P597 504 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 LPCAT2Q7L5N7 544 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 TBC1D1Q86TI0 1168 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 TRABD2AQ86V40 505 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 DCP2Q8IU60 420 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 FBXL6Q8N531 539 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 NKAPQ8N5F7 415 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 DTWD2Q8NBA8 298 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 TP53I13Q8NBR0 393 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 SNX19Q92543 992 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 KLK6Q92876 244 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 CENPTQ96BT3 561 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 ATXN7L3BQ96GX2 97 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 RMI1Q9H9A7 625 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 SSU72Q9NP77 194 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 KCNK9Q9NPC2 374 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 PRMT8Q9NR22 394 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 SPATS2LQ9NUQ6 558 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 C2orf42Q9NWW7 574 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 KLHL42Q9P2K6 505 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 CTNNAL1Q9UBT7 734 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 DCDC2Q9UHG0 476 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 TRMT6Q9UJA5 497 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 MTO1Q9Y2Z2 717 aaKnown RBP9.12□□□□□ -0.95
ACTN1-218ENST00000556343 ACOT9Q9Y305 439 aa9.12□□□□□ -0.95
ACTN1-218ENST00000556343 IGLV3-16A0A075B6K0 115 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 A0A1W2PPC4 97 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 A6NNZ2 444 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 METTL12A8MUP2 240 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 FADS2P1A8MWK0 482 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 COPEO14579 308 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 INPP4BO15327 924 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 KCNJ13O60928 360 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 TRIM16O95361 564 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 SYF2O95926 243 aaKnown RBP9.11□□□□□ -0.95
ACTN1-218ENST00000556343 GSTA1P08263 222 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 PRSS56P0CW18 603 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 PYGBP11216 843 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 MYCLP1P12525 358 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-218ENST00000556343 VCLP18206 1134 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 KRT4P19013 534 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 TRIM23P36406 574 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 SLC26A3P40879 764 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 RABIFP47224 123 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 PXNP49023 591 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-218ENST00000556343 RGS4P49798 205 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 THOP1P52888 689 aa9.11□□□□□ -0.95
ACTN1-218ENST00000556343 NUBP1P53384 320 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms