RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 EDDM13A0A1B0GTR0 161 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 A0A1W2PQF6 199 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 DRGXA6NNA5 263 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 MEI4A8MW99 385 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 I6L893 689 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 K7ERQ8 282 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 PLK4O00444 970 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 KPNA3O00505 521 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 NPC1O15118 1278 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 RAMP2O60895 175 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ZNF217O75362 1048 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 RNASEH2AO75792 299 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 NEBLO76041 1014 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TOX4O94842 621 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SEC24DO94855 1032 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 MT-CO1P00395 513 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CFIP05156 583 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CYP1A2P05177 515 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 PTMAP06454 111 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 GAAP10253 952 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 GOT1P17174 413 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 BCKDHBP21953 392 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 OXTRP30559 389 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SLC8A1P32418 973 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ACVRL1P37023 503 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 KIR2DL3P43628 341 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 GPR3P46089 330 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CDH6P55285 790 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 RPS14P62263 151 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 KLF1Q13351 362 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 EIF4EBP2Q13542 120 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SPIDRQ14159 915 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 LLGL1Q15334 1064 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CA9Q16790 459 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 BOLA3Q53S33 107 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TOR2AQ5JU69 321 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TCTN3Q6NUS6 607 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SETD3Q86TU7 594 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TMTC1Q8IUR5 882 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 GLB1L2Q8IW92 636 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 HDDC3Q8N4P3 179 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TC2NQ8N9U0 490 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ZBTB44Q8NCP5 570 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 OR2T3Q8NH03 318 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 OR8D1Q8WZ84 308 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 RUBCNQ92622 972 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CENPIQ92674 756 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ANP32BQ92688 251 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CELF6Q96J87 481 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SYT11Q9BT88 431 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 MENTQ9BUN1 341 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 SNRNP25Q9BV90 132 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TRIM8Q9BZR9 551 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 CD93Q9NPY3 652 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ITM2CQ9NQX7 267 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 DYRK4Q9NR20 520 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 KLHL11Q9NVR0 708 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 DNAJC28Q9NX36 388 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 FBXL12Q9NXK8 326 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 HYOU1Q9Y4L1 999 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ACTL7AQ9Y615 435 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 EPN1Q9Y6I3 576 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ASCC3Q8N3C0 2202 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
ATXN3-237ENST00000556274 ZFHX2Q9C0A1 2572 aaPredicted RBP4.71□□□□□ -1.65
ATXN3-237ENST00000556274 FAM186AA6NE01 2351 aa4.71□□□□□ -1.65
ATXN3-237ENST00000556274 MUC22E2RYF6 1773 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ILVBLA1L0T0 632 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 TARSL2A2RTX5 802 aaKnown RBP4.71□□□□□ -1.66
ATXN3-237ENST00000556274 GOLGA6L3A6NEY3 463 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ARHGAP42A6NI28 874 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 PCNX2A6NKB5 2137 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 ALG1L2C9J202 215 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RASA4BC9J798 803 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 MID1O15344 667 aa4.71□□□□□ -1.66
ATXN3-237ENST00000556274 RASA4O43374 803 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms