RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 INAVAQ3KP66 663 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 HP1BP3Q5SSJ5 553 aaPredicted RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 STEAP4Q687X5 459 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 ZNF449Q6P9G9 518 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 DOK6Q6PKX4 331 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 LAYNQ6UX15 382 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 KCNMB4Q86W47 210 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 SERPINA9Q86WD7 417 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 GALNT13Q8IUC8 556 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 RELL1Q8IUW5 271 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 HID1Q8IV36 788 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 ANKMY2Q8IV38 441 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 RBFAQ8N0V3 343 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 SDR16C5Q8N3Y7 309 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 FSTL5Q8N475 847 aaPredicted RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 GSDMBQ8TAX9 411 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 CDKL2Q92772 493 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 CERS2Q96G23 380 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 COX14Q96I36 57 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 PWWP2AQ96N64 755 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 ELF4Q99607 663 aaPredicted RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 GTPBP2Q9BX10 602 aaKnown RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 TSSK1BQ9BXA7 367 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 LGR4Q9BXB1 951 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 VPS37BQ9H9H4 285 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 PPANQ9NQ55 473 aaKnown RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 SEMA4GQ9NTN9 838 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 DNAJC28Q9NX36 388 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 NSMCE4AQ9NXX6 385 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 SPASTQ9UBP0 616 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 CNOT6Q9ULM6 557 aaKnown RBP7.56□□□□□ -1.2
TDP1-214ENST00000556063 SLC17A4Q9Y2C5 497 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 SNX11Q9Y5W9 270 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 SLCO1B1Q9Y6L6 691 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 DGKBQ9Y6T7 804 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 PIEZO1Q92508 2521 aa7.56□□□□□ -1.2
TDP1-214ENST00000556063 ASCC3Q8N3C0 2202 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 GVINP1Q7Z2Y8 2422 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZCWPW2A0A1B0GU75 182 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PRSS38A1L453 326 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TMEM202A6NGA9 273 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 OR51F1A6NGY5 319 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PATE3B3GLJ2 98 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GAPDHSO14556 408 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 GRID2O43424 1007 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 NUAK1O60285 661 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 KCNJ13O60928 360 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 BANF1O75531 89 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 AP2A2O94973 939 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CSF2P04141 144 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CEACAM5P06731 702 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GSTM1P09488 218 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 NME1P15531 152 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ENGP17813 658 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ACRV1P26436 265 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 STX2P32856 288 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 RXRGP48443 463 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ARCN1P48444 511 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 CCT8P50990 548 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 HK3P52790 923 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GSTM4Q03013 218 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 MGAT5Q09328 741 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TMEM115Q12893 351 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ILF3Q12906 894 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■□□□□ 9.3
TDP1-214ENST00000556063 EIF2B5Q13144 721 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 LRP8Q14114 963 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 SUZ12Q15022 739 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ELOCQ15369 112 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CCDC6Q16204 474 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 DBN1Q16643 649 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZNF423Q2M1K9 1284 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ALG11Q2TAA5 492 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 HLA-BQ31612 363 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 MAP9Q49MG5 647 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 AASDHQ4L235 1098 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZNF470Q6ECI4 717 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PSAPL1Q6NUJ1 521 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 KIAA0408Q6ZU52 694 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 C3orf62Q6ZUJ4 267 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CYS1Q717R9 158 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 RD3Q7Z3Z2 195 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 LRRTM4Q86VH4 590 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 LRRC6Q86X45 466 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 TRAPPC5Q8IUR0 188 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 IGDCC3Q8IVU1 814 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PHACTR4Q8IZ21 702 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 SLC22A18ASQ8N1D0 253 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PELI3Q8N2H9 469 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GPR150Q8NGU9 434 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TSACCQ96A04 125 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 SCARF2Q96GP6 870 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 C9orf72Q96LT7 481 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 FCRL3Q96P31 734 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms