RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PSPC1Q8WXF1 523 aaKnown RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 ST8SIA4Q92187 359 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 ZNF653Q96CK0 615 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 SAAL1Q96ER3 474 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 POM121L2Q96KW2 1035 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 LINC00479Q96M42 142 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 USP44Q9H0E7 712 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 RPS10P5Q9NQ39 176 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 MAP3K20Q9NYL2 800 aaKnown RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 ABI3Q9P2A4 366 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 TMEM181Q9P2C4 612 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 CAPN7Q9Y6W3 813 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 AGRNO00468 2067 aa3.28□□□□□ -1.89
SNX6-204ENST00000555541 KDM3AQ9Y4C1 1321 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 A0A1W2PP11 408 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 M0QZ24 198 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 ANKRD28O15084 1053 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 KCNN4O15554 427 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 ZNF182P17025 639 aaPredicted RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 UGT1A1P22309 533 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 UBA1P22314 1058 aaKnown RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 COG7P83436 770 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 TBX2Q13207 712 aaPredicted RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 BIRC3Q13489 604 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 TMEM187Q14656 261 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 ZC2HC1CQ53FD0 456 aaPredicted RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 KRTCAP3Q53RY4 240 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 PAPD4Q6PIY7 484 aaKnown RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 PLEKHM3Q6ZWE6 761 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 ANO5Q75V66 913 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 HCAR2Q8TDS4 363 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 SLC44A1Q8WWI5 657 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 STAMBPL1Q96FJ0 436 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 ART5Q96L15 291 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 HARBI1Q96MB7 349 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 SLC28A3Q9HAS3 691 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 TCP11L1Q9NUJ3 509 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 SAGE1Q9NXZ1 904 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 LUZP4Q9P127 313 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 MARCH4Q9P2E8 410 aaPredicted RBP3.27□□□□□ -1.89
SNX6-204ENST00000555541 GJD2Q9UKL4 321 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 MKLN1Q9UL63 735 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 CAMK2AQ9UQM7 478 aa3.27□□□□□ -1.89
SNX6-204ENST00000555541 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 OR5K3A6NET4 321 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 CSF2RAP15509 400 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 IL7RP16871 459 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 EPHA8P29322 1005 aaPredicted RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 KRTAP10-1P60331 282 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 IRX6P78412 446 aaPredicted RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 SPOCK1Q08629 439 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 DCTN2Q13561 401 aaKnown RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 ZNF239Q16600 458 aaKnown RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 CDONQ4KMG0 1287 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 CDC73Q6P1J9 531 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 RBMS3Q6XE24 437 aaKnown RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 ATG9AQ7Z3C6 839 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 ZNF440Q8IYI8 595 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 ADSSL1Q8N142 457 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 OR14L1PQ8NHC6 308 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 DNAAF4Q8WXU2 420 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 PHF21AQ96BD5 680 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 ARHGEF26Q96DR7 871 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 TMEM68Q96MH6 324 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 OPRPNQ99935 248 aaPredicted RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 LRMDAQ9H2I8 198 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 RANBP17Q9H2T7 1088 aaKnown RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 PDZD7Q9H5P4 517 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 OR14J1Q9UGF5 321 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 SLC13A4Q9UKG4 626 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 NAALADL1Q9UQQ1 740 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 C2CD2Q9Y426 696 aa3.26□□□□□ -1.89
SNX6-204ENST00000555541 LRRFIP2Q9Y608 721 aaKnown RBP3.26□□□□□ -1.89
SNX6-204ENST00000555541 A0A1W2PRG0 241 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 CIDEAO60543 219 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 PDE9AO76083 593 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 SORBS2O94875 1100 aaKnown RBP3.25□□□□□ -1.89
SNX6-204ENST00000555541 NKX2-2O95096 273 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 TSHBP01222 138 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 MAPK9P45984 424 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 LCN10Q6JVE6 187 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 TSSK4Q6SA08 328 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 STXBP4Q6ZWJ1 553 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 GSTA5Q7RTV2 222 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 PIWIL4Q7Z3Z4 852 aaKnown RBP3.25□□□□□ -1.89
SNX6-204ENST00000555541 RBM15BQ8NDT2 890 aaKnown RBP3.25□□□□□ -1.89
SNX6-204ENST00000555541 STRA6Q9BX79 667 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 TRIM15Q9C019 465 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 WASH6PQ9NQA3 447 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 PCDHB16Q9NRJ7 776 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 SLC7A10Q9NS82 523 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 ZDHHC18Q9NUE0 388 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 RASAL2Q9UJF2 1139 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
SNX6-204ENST00000555541 IGKV6D-41A0A0C4DH26 115 aa3.24□□□□□ -1.89
SNX6-204ENST00000555541 A0A1W2PPI3 338 aa3.24□□□□□ -1.89
SNX6-204ENST00000555541 TMEM178BH3BS89 294 aa3.24□□□□□ -1.89
SNX6-204ENST00000555541 PSMD14O00487 310 aa3.24□□□□□ -1.89
SNX6-204ENST00000555541 PAGE4O60829 102 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms