RNA–Protein interactions for RNA: ENST00000555437.5

CIPC-205, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3 BASIC

Gene CIPC, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-205ENST00000555437 OR2AG1Q9H205 316 aa16.9■□□□□ 0.3
CIPC-205ENST00000555437 ARFGAP3Q9NP61 516 aa16.9■□□□□ 0.3
CIPC-205ENST00000555437 TREX1Q9NSU2 369 aa16.9■□□□□ 0.3
CIPC-205ENST00000555437 SPATS2LQ9NUQ6 558 aaKnown RBP16.9■□□□□ 0.3
CIPC-205ENST00000555437 NCKIPSDQ9NZQ3 722 aa16.9■□□□□ 0.3
CIPC-205ENST00000555437 PLEKHM1Q9Y4G2 1056 aa16.9■□□□□ 0.3
CIPC-205ENST00000555437 UNC13CQ8NB66 2214 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 AP3B1O00203 1094 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 CCL22O00626 93 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 GRID2O43424 1007 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 MTX2O75431 263 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 GP1BAP07359 652 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 MLNP12872 115 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 AK4P27144 223 aaPredicted RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 CASQ1P31415 396 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 FOXN2P32314 431 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 VPS41P49754 854 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 B4GALNT1Q00973 533 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 TMEM115Q12893 351 aaPredicted RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 ILF3Q12906 894 aaKnown RBP eCLIP16.89■□□□□ 0.29
CIPC-205ENST00000555437 GPR33Q49SQ1 333 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 CCDC38Q502W7 563 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 RNASEH2BQ5TBB1 312 aaKnown RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 XKR5Q6UX68 686 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 SNX20Q7Z614 316 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 GALNT13Q8IUC8 556 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 SFTPA2Q8IWL1 248 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 NXPE1Q8N323 547 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 RASGEF1AQ8N9B8 481 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 KYQ8NBH2 561 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 CCDC97Q96F63 343 aaPredicted RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 IL22Q9GZX6 179 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 MRM3Q9HC36 420 aaKnown RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 TAAR2Q9P1P5 351 aa16.89■□□□□ 0.29
CIPC-205ENST00000555437 APOBEC2Q9Y235 224 aaKnown RBP16.89■□□□□ 0.29
CIPC-205ENST00000555437 FRYQ5TBA9 3013 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 TP73O15350 636 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 RFPL3O75679 317 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 TRIM16O95361 564 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 ASMTLO95671 621 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 MYF5P13349 255 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 MC4RP32245 332 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 NPY2RP49146 381 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 LMAN1P49257 510 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 LAMB3Q13751 1172 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
CIPC-205ENST00000555437 SMAD1Q15797 465 aaKnown RBP16.88■□□□□ 0.29
CIPC-205ENST00000555437 PCID2Q5JVF3 399 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 SYDE1Q6ZW31 735 aaPredicted RBP16.88■□□□□ 0.29
CIPC-205ENST00000555437 MARK2Q7KZI7 788 aaKnown RBP16.88■□□□□ 0.29
CIPC-205ENST00000555437 NLRP9Q7RTR0 991 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 TAF8Q7Z7C8 310 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 NAGSQ8N159 534 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 AGGF1Q8N302 714 aaeCLIP16.88■□□□□ 0.29
CIPC-205ENST00000555437 RUNDC3BQ96NL0 473 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 TIMM29Q9BSF4 260 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 KIFC1Q9BW19 673 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 ASB8Q9H765 288 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 SUDS3Q9H7L9 328 aaPredicted RBP16.88■□□□□ 0.29
CIPC-205ENST00000555437 SLC23A2Q9UGH3 650 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 SLC2A6Q9UGQ3 507 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 MOSPD1Q9UJG1 213 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 GPR34Q9UPC5 381 aa16.88■□□□□ 0.29
CIPC-205ENST00000555437 DNALI1O14645 258 aaPredicted RBP16.87■□□□□ 0.29
CIPC-205ENST00000555437 CDK4P11802 303 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 CDKN1CP49918 316 aaPredicted RBP16.87■□□□□ 0.29
CIPC-205ENST00000555437 CTSCP53634 463 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 TMPRSS15P98073 1019 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 DMPKQ09013 629 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 SEPT6Q14141 434 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 NR1D2Q14995 579 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 NR0B2Q15466 257 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 TCEA2Q15560 299 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 SKIDA1Q1XH10 827 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 ZNF658BQ4V348 819 aaPredicted RBP16.87■□□□□ 0.29
CIPC-205ENST00000555437 GUSBP11Q6P575 273 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 ZNF438Q7Z4V0 828 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 LRRTM4Q86VH4 590 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 PIANPQ8IYJ0 282 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 SCG3Q8WXD2 468 aaKnown RBP16.87■□□□□ 0.29
CIPC-205ENST00000555437 ULK4Q96C45 1275 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 C16orf45Q96MC5 204 aaPredicted RBP16.87■□□□□ 0.29
CIPC-205ENST00000555437 SERPINB12Q96P63 405 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 SYBUQ9NX95 663 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 GULP1Q9UBP9 304 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 PRKAB1Q9Y478 270 aa16.87■□□□□ 0.29
CIPC-205ENST00000555437 KNTC1P50748 2209 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 CCDC162PA2VCL2 907 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 KMOO15229 486 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 CDK14O94921 469 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 EML2O95834 649 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 TOP3BO95985 862 aaKnown RBP16.86■□□□□ 0.29
CIPC-205ENST00000555437 PRSS56P0CW18 603 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 ITGALP20701 1170 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 ACRV1P26436 265 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 MGAT1P26572 445 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 ARNTP27540 789 aa16.86■□□□□ 0.29
CIPC-205ENST00000555437 DUSP3P51452 185 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms