RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PGAP3Q96FM1 320 aaPredicted RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 GRAMD2BQ96HH9 432 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 DGAT2Q96PD7 388 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 RBM38Q9H0Z9 239 aaKnown RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 MAGIXQ9H6Y5 334 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 SEBOXQ9HB31 216 aaPredicted RBP5.33□□□□□ -1.56
VRK1-205ENST00000555402 MMP25Q9NPA2 562 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 ZNF148Q9UQR1 794 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 PTGDR2Q9Y5Y4 395 aa5.33□□□□□ -1.56
VRK1-205ENST00000555402 LOC102723996A0A087X1L8 192 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 hDV102S1A0JD36 115 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 MAP2K7O14733 419 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 TNFRSF13BO14836 293 aaPredicted RBP5.32□□□□□ -1.56
VRK1-205ENST00000555402 IPO8O15397 1037 aaKnown RBP5.32□□□□□ -1.56
VRK1-205ENST00000555402 SPINT2O43291 252 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 RGS14O43566 566 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 SPRY3O43610 288 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 PSMD10O75832 226 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 ZWINTO95229 277 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 CH25HO95992 272 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 BCL10O95999 233 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 GH2P01242 217 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 MYBL1P10243 752 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 GJA1P17302 382 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 C21orf33P30042 268 aaPredicted RBP5.32□□□□□ -1.56
VRK1-205ENST00000555402 MMP14P50281 582 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 GPS2Q13227 327 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 EFNB3Q15768 340 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 CTF1Q16619 201 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 TCP11X2Q5H9J9 407 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 KRT80Q6KB66 452 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 DENND5BQ6ZUT9 1274 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 PLPPR4Q7Z2D5 763 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 VSIG1Q86XK7 387 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 OR6J1Q8NGC5 347 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 DUSP19Q8WTR2 217 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 PTPMT1Q8WUK0 201 aaPredicted RBP5.32□□□□□ -1.56
VRK1-205ENST00000555402 OIT3Q8WWZ8 545 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 VPS33AQ96AX1 596 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 DDOQ99489 341 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 TMEM39BQ9GZU3 492 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 C17orf75Q9HAS0 396 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 DNAJB4Q9UDY4 337 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 AMACRQ9UHK6 382 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 HACL1Q9UJ83 578 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 ACSL5Q9ULC5 683 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 PCDHGA5Q9Y5G8 931 aa5.32□□□□□ -1.56
VRK1-205ENST00000555402 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.32□□□□□ -1.56
VRK1-205ENST00000555402 GPR75-ASB3A0A0A6YYF3 556 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 OR6C75A6NL08 312 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 LACTBL1A8MY62 500 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 HS3ST1O14792 307 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 PLRG1O43660 514 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 TBX10O75333 385 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 SOX30O94993 753 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 MXI1P50539 228 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 ARSEP51690 589 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 ROR2Q01974 943 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 CXCL9Q07325 125 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 SNTB1Q13884 538 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 LETM2Q2VYF4 491 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 NSUN5P2Q63ZY6 315 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 FAM9BQ8IZU0 186 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 GUF1Q8N442 669 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 TDRD5Q8NAT2 981 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 OR14A16Q8NHC5 309 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 SECISBP2LQ93073 1101 aaKnown RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 RMDN1Q96DB5 314 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 SMC6Q96SB8 1091 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 SEMA3CQ99985 751 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 MMP27Q9H306 513 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 CHMP1AQ9HD42 196 aaPredicted RBP5.31□□□□□ -1.56
VRK1-205ENST00000555402 SH3GLB2Q9NR46 395 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 HIF1ANQ9NWT6 349 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 TAS2R14Q9NYV8 317 aa5.31□□□□□ -1.56
VRK1-205ENST00000555402 INAFM1C9JVW0 142 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 H0YIN7 160 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 NDUFS7O75251 213 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 SERPINI2O75830 405 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 HSPA4LO95757 839 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 VPREB1P12018 145 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 CPT2P23786 658 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
VRK1-205ENST00000555402 RFX2P48378 723 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 ZXDBP98169 803 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 KCNT1Q5JUK3 1230 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 FRG2Q64ET8 278 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 DHRS7BQ6IAN0 325 aaPredicted RBP5.3□□□□□ -1.56
VRK1-205ENST00000555402 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 GSG1LQ6UXU4 331 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 FAM47EQ6ZV65 393 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 BEST3Q8N1M1 668 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 PCDH20Q8N6Y1 951 aaKnown RBP5.3□□□□□ -1.56
VRK1-205ENST00000555402 B4GALNT2Q8NHY0 566 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 LPGAT1Q92604 370 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 SPATA17Q96L03 361 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 SPATC1LQ9H0A9 340 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 RAD21L1Q9H4I0 556 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms