RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 MARK2Q7KZI7 788 aaKnown RBP20.33■□□□□ 0.84
FOXN3-209ENST00000555353 GLYATL1Q969I3 302 aa20.33■□□□□ 0.84
FOXN3-209ENST00000555353 RAB21Q9UL25 225 aa20.33■□□□□ 0.84
FOXN3-209ENST00000555353 OAS3Q9Y6K5 1087 aaKnown RBP20.33■□□□□ 0.84
FOXN3-209ENST00000555353 YY2O15391 372 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 FTH1P19P0C7X4 201 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 DAB2P98082 770 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 ITGA9Q13797 1035 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 CHRNA6Q15825 494 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 PROX2Q3B8N5 592 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 MAP9Q49MG5 647 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 ATP13A5Q4VNC0 1218 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 DNAJC21Q5F1R6 531 aaKnown RBP20.32■□□□□ 0.84
FOXN3-209ENST00000555353 LVRNQ6Q4G3 990 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 CENPUQ71F23 418 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 TAF8Q7Z7C8 310 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 DTX3LQ8TDB6 740 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 APOLD1Q96LR9 279 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 SERPINB12Q96P63 405 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 VPS35Q96QK1 796 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 PHACTR1Q9C0D0 580 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 CASS4Q9NQ75 786 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 EVA1BQ9NVM1 165 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 TRNAU1APQ9NX07 287 aaKnown RBP20.32■□□□□ 0.84
FOXN3-209ENST00000555353 KCTD3Q9Y597 815 aa20.32■□□□□ 0.84
FOXN3-209ENST00000555353 ARHGEF17Q96PE2 2063 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-209ENST00000555353 ZFC3H1O60293 1989 aaKnown RBP20.31■□□□□ 0.84
FOXN3-209ENST00000555353 TP73O15350 636 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 LDB2O43679 373 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 FUCA1P04066 466 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 CKMT2P17540 419 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 HADHAP40939 763 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 ZNF140P52738 457 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-209ENST00000555353 ILF3Q12906 894 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■□□□ 13
FOXN3-209ENST00000555353 DNAJC3Q13217 504 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 CCDC157Q569K6 752 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 GALNT13Q8IUC8 556 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 FAM181AQ8N9Y4 354 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 GDAP1Q8TB36 358 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 PTCD2Q8WV60 388 aaKnown RBP20.31■□□□□ 0.84
FOXN3-209ENST00000555353 SCARF2Q96GP6 870 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-209ENST00000555353 OR2M4Q96R27 311 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 C19orf43Q9BQ61 176 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 GSDMCQ9BYG8 508 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 TRIM39Q9HCM9 518 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 ARFGAP3Q9NP61 516 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 NCKIPSDQ9NZQ3 722 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 BFARQ9NZS9 450 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 APPL1Q9UKG1 709 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 GPSM3Q9Y4H4 160 aa20.31■□□□□ 0.84
FOXN3-209ENST00000555353 UQCRHLA0A096LP55 91 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 EIF3HO15372 352 aaKnown RBP eCLIP20.3■□□□□ 0.84
FOXN3-209ENST00000555353 ERLIN1O75477 346 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 PRAMEF1O95521 474 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 UQCRHP07919 91 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 GRIA1P42261 906 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 NPY2RP49146 381 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 C6orf132Q5T0Z8 1188 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 OR13C4Q8NGS5 318 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 GLMNQ92990 594 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 RMI1Q9H9A7 625 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 ZNHIT2Q9UHR6 403 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 FKBPLQ9UIM3 349 aa20.3■□□□□ 0.84
FOXN3-209ENST00000555353 GPR89AB7ZAQ6 455 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 GPR89BP0CG08 455 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ECHS1P30084 290 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 DUSP3P51452 185 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-209ENST00000555353 TMPRSS15P98073 1019 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 LAMB3Q13751 1172 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 PYCR3Q53H96 274 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 FAM46DQ8NEK8 389 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 CCL4L1Q8NHW4 92 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 OR2AG1Q9H205 316 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 TOR4AQ9NXH8 423 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ATXN10Q9UBB4 475 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 GPR34Q9UPC5 381 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A9O60656 530 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 TRIM16O95361 564 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ADRB1P08588 477 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A6P19224 532 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A1P22309 533 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A4P22310 534 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A3P35503 534 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 UGT1A5P35504 534 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 SESN2P58004 480 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-209ENST00000555353 BRD3Q15059 726 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 BBS9Q3SYG4 887 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 CERCAMQ5T4B2 595 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ZNF648Q5T619 568 aaPredicted RBP20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ZNF534Q76KX8 674 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 SLCO6A1Q86UG4 719 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 CAND1Q86VP6 1230 aaKnown RBP20.29■□□□□ 0.84
FOXN3-209ENST00000555353 CCDC25Q86WR0 208 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 PNPLA1Q8N8W4 532 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 ZNF398Q8TD17 642 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 GPBAR1Q8TDU6 330 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 STYXQ8WUJ0 223 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 LRRC39Q96DD0 335 aa20.29■□□□□ 0.84
FOXN3-209ENST00000555353 DNAJC1Q96KC8 554 aaKnown RBP20.29■□□□□ 0.84
FOXN3-209ENST00000555353 TTC25Q96NG3 672 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms