RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CSF2P04141 144 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 TUBBP07437 444 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 IVLP07476 585 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 OGNP20774 298 aaKnown RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 PMLP29590 882 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 CA5AP35218 305 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 RXRGP48443 463 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 CDKN1CP49918 316 aaPredicted RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 HK3P52790 923 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 EIF2B5Q13144 721 aaKnown RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 ZNF423Q2M1K9 1284 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 ERCC6LQ2NKX8 1250 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 ALG11Q2TAA5 492 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 HLA-BQ31612 363 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 WDR93Q6P2C0 686 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 ASCL5Q7RTU5 278 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 ADGRG6Q86SQ4 1221 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 KCNMB4Q86W47 210 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 CERS2Q96G23 380 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 SCARF2Q96GP6 870 aaPredicted RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 ZNF514Q96K75 400 aaPredicted RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 C9orf72Q96LT7 481 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 TCF12Q99081 682 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 FAM167BQ9BTA0 163 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 OR2AG1Q9H205 316 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 GAREM1Q9H706 876 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 FGF22Q9HCT0 170 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 DNAJC28Q9NX36 388 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 ATXN10Q9UBB4 475 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHD8-208ENST00000555301 MOSPD1Q9UJG1 213 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 VPS9D1Q9Y2B5 631 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 TMEM98Q9Y2Y6 226 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 V9GYY5 206 aaPredicted RBP14.13□□□□□ -0.15
CHD8-208ENST00000555301 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
CHD8-208ENST00000555301 IGLV3-16A0A075B6K0 115 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 LNP1A1A4G5 178 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 GOLGA8KD6RF30 607 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 GOLGA8TH3BQL2 631 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 MTX2O75431 263 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 PRSS56P0CW18 603 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 NME1P15531 152 aaKnown RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 ZNF7P17097 686 aaPredicted RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 JUNDP17535 347 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 NSG1P42857 185 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 HNRNPKP61978 463 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHD8-208ENST00000555301 DBN1Q16643 649 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 HSP90AA5PQ58FG0 334 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 ZNF449Q6P9G9 518 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 PACS1Q6VY07 963 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 CCNI2Q6ZMN8 369 aaPredicted RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 C3orf62Q6ZUJ4 267 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 CYS1Q717R9 158 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 GALNT13Q8IUC8 556 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 CILP2Q8IUL8 1156 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 HID1Q8IV36 788 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 PHACTR4Q8IZ21 702 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 RBFAQ8N0V3 343 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 OR1E3Q8WZA6 343 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 TSACCQ96A04 125 aaPredicted RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 PDXPQ96GD0 296 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 GTPBP2Q9BX10 602 aaKnown RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 SLC13A1Q9BZW2 595 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 CARS2Q9HA77 564 aaKnown RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 PLAC1Q9HBJ0 212 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 CYP4F12Q9HCS2 524 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 ARFGAP3Q9NP61 516 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 MRPL40Q9NQ50 206 aaKnown RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 PPANQ9NQ55 473 aaKnown RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 FSCN3Q9NQT6 498 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 MOCS1Q9NZB8 636 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 MARCH4Q9P2E8 410 aaPredicted RBP14.12□□□□□ -0.15
CHD8-208ENST00000555301 SUFUQ9UMX1 484 aa14.12□□□□□ -0.15
CHD8-208ENST00000555301 A0A1B0GTQ1 180 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 F8W8V4 182 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 QSOX1O00391 747 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 CHUKO15111 745 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 GRID2O43424 1007 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 DNAJC6O75061 913 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 NDUFS3O75489 264 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 AP2A2O94973 939 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 ERVK-10P10266 1014 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 ATP1B2P14415 290 aaPredicted RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 ZNF8P17098 575 aaPredicted RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 TGM1P22735 817 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 SSTR1P30872 391 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 PHBP35232 272 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 POLD2P49005 469 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 SEMA3AQ14563 771 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 SF3A2Q15428 464 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 TYSND1Q2T9J0 566 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 KHDC1Q4VXA5 237 aaKnown RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 ZNF542PQ5EBM4 170 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 ZNF648Q5T619 568 aaPredicted RBP14.11□□□□□ -0.15
CHD8-208ENST00000555301 ZNF470Q6ECI4 717 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 PRR23CQ6ZRP0 262 aa14.11□□□□□ -0.15
CHD8-208ENST00000555301 KIAA0408Q6ZU52 694 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms