RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PPHLN1Q8NEY8 458 aaKnown RBP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 OR6C4Q8NGE1 309 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 OR4C6Q8NH72 309 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 DCUN1D1Q96GG9 259 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 CARS2Q9HA77 564 aaKnown RBP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 CYP4F12Q9HCS2 524 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 NLE1Q9NVX2 485 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 FTSJ1Q9UET6 329 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 ZNHIT2Q9UHR6 403 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 CDC23Q9UJX2 597 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
TMEM260-206ENST00000555046 APOBEC2Q9Y235 224 aaKnown RBP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 DNMT3AQ9Y6K1 912 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-206ENST00000555046 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PFDN6O15212 129 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 KMOO15229 486 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 NUAK1O60285 661 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SRP72O76094 671 aaKnown RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 URI1O94763 535 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 TRIM16O95361 564 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SOD1P00441 154 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CKMT2P17540 419 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PAMP19021 973 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 MSH3P20585 1137 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PSMA3P25788 255 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 VPS41P49754 854 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 TMEM115Q12893 351 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ILKQ13418 452 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 NFATC2Q13469 925 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PTK6Q13882 451 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CHRNA6Q15825 494 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 WHAMMP3Q1A5X7 153 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CERCAMQ5T4B2 595 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ZCCHC8Q6NZY4 707 aaKnown RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 FAM151BQ6UXP7 276 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CERS6Q6ZMG9 384 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PRUNE1Q86TP1 453 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 HOOK3Q86VS8 718 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 GABPB2Q8TAK5 448 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 OR1E3Q8WZA6 343 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CDKN2AIPNLQ96HQ2 116 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 AGAP2Q99490 1192 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 DDX47Q9H0S4 455 aaKnown RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ASB8Q9H765 288 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SMARCAL1Q9NZC9 954 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 KLF15Q9UIH9 416 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ANAPC5Q9UJX4 755 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
TMEM260-206ENST00000555046 SUFUQ9UMX1 484 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 GPR34Q9UPC5 381 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 TMEM98Q9Y2Y6 226 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 NEU2Q9Y3R4 380 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 PCDHGA1Q9Y5H4 931 aa10.49□□□□□ -0.73
TMEM260-206ENST00000555046 ITPR3Q14573 2671 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 FADS2P1A8MWK0 482 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 QSOX1O00391 747 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 YY2O15391 372 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 GRID2O43424 1007 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 BUD23O43709 281 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A9O60656 530 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 SDC3O75056 442 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CBFA2T3O75081 653 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CAPNS1P04632 268 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 SLC2A4P14672 509 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A6P19224 532 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A1P22309 533 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A4P22310 534 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A3P35503 534 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 UGT1A5P35504 534 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 GNPDA1P46926 289 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 ZNF140P52738 457 aaPredicted RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 SESN2P58004 480 aaPredicted RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 PRAMEP78395 509 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 E2F1Q01094 437 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CACNG1Q06432 222 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 OLIG2Q13516 323 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 PYCR3Q53H96 274 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 DNAJC21Q5F1R6 531 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 AARS2Q5JTZ9 985 aaKnown RBP10.48□□□□□ -0.73
TMEM260-206ENST00000555046 TPRG1LQ5T0D9 272 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 TSTD2Q5T7W7 516 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CASC4Q6P4E1 433 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 DOK6Q6PKX4 331 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 TAS2R42Q7RTR8 314 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 KANSL1Q7Z3B3 1105 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 CCNJLQ8IV13 435 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 PELI3Q8N2H9 469 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 AVL9Q8NBF6 648 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 FAM46DQ8NEK8 389 aa10.48□□□□□ -0.73
TMEM260-206ENST00000555046 DDHD1Q8NEL9 900 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms