RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PGS1Q32NB8 556 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 RAB41Q5JT25 222 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 OGFOD2Q6N063 350 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 KDELC1Q6UW63 502 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 GPRIN3Q6ZVF9 776 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 DET1Q7L5Y6 550 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 OR10A6Q8NH74 314 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 RIN3Q8TB24 985 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 ZBTB18Q99592 522 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SYTL2Q9HCH5 934 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 PCDH12Q9NPG4 1184 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 MAP10Q9P2G4 905 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 ZFP37Q9Y6Q3 630 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 CYP2C18P33260 490 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 RPS9P46781 194 aaKnown RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 IL2P60568 153 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ITGADQ13349 1161 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 IHHQ14623 411 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ERMP1Q7Z2K6 904 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 GALNT10Q86SR1 603 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ISL2Q96A47 359 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 MAF1Q9H063 256 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ASB1Q9Y576 335 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 H3BNH8 94 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 B4GALT3O60512 393 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 SEC22BO75396 215 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 DIRAS1O95057 198 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 C1RP00736 705 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 RHOQP17081 205 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 SLC6A2P23975 617 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 CASP9P55211 416 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 CARTPTQ16568 116 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 SPRYD7Q5W111 196 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 LARP4Q71RC2 724 aaKnown RBP eCLIP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 SYVN1Q86TM6 617 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 CHERPQ8IWX8 916 aaKnown RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 TSGA13Q96PP4 275 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 CEPT1Q9Y6K0 416 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 UGT1A1P22309 533 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 UGT1A4P22310 534 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ADRA1AP35348 466 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 UGT1A3P35503 534 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 UGT1A5P35504 534 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 KCNA10Q16322 511 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ANKRD34AQ69YU3 496 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 PIANPQ8IYJ0 282 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 RANBP9Q96S59 729 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 OLAHQ9NV23 265 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 RIC8BQ9NVN3 520 aa11.76□□□□□ -0.53
XRCC3-208ENST00000554811 POLR3BQ9NW08 1133 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 A0A0J9YVX5 310 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 PFDN6O15212 129 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 LDB2O43679 373 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 NBNO60934 754 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 G6PDP11413 515 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 GPX3P22352 226 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 ADSLP30566 484 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 IL5RAQ01344 420 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 ABRAXAS1Q6UWZ7 409 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 MBOAT1Q6ZNC8 495 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 IRGQQ8WZA9 623 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 SGCDQ92629 289 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 TBC1D23Q9NUY8 699 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 GTF2IRD1Q9UHL9 959 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 IKZF3Q9UKT9 509 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 SLC8A2Q9UPR5 921 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 KRT87PA6NCN2 255 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 IDO1P14902 403 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 MAGP20916 626 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 RPL34P49207 117 aaKnown RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 LDLRAD1Q5T700 205 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
XRCC3-208ENST00000554811 KLHL35Q6PF15 583 aa11.75□□□□□ -0.53
XRCC3-208ENST00000554811 SLC22A15Q8IZD6 547 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms