RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 DNMT3LQ9UJW3 386 aa15.56■□□□□ 0.08
ARHGEF40-203ENST00000554514 PCDHB7Q9Y5E2 793 aa15.56■□□□□ 0.08
ARHGEF40-203ENST00000554514 LAMA3Q16787 3333 aa15.56■□□□□ 0.08
ARHGEF40-203ENST00000554514 GOLGA8CPA6NN73 597 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 INPPL1O15357 1258 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 STX7O15400 261 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 PYGLP06737 847 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 SLC11A2P49281 568 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 HK3P52790 923 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 NR1H2P55055 460 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 RING1Q06587 406 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 GPR17Q13304 367 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 RNF219Q5W0B1 726 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 BLOC1S3Q6QNY0 202 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CARM1Q86X55 608 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 ZNF786Q8N393 782 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CYGBQ8WWM9 190 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 PSKH2Q96QS6 385 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 MAGEH1Q9H213 219 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 MYRFQ9Y2G1 1151 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 GPR45Q9Y5Y3 372 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CCDC154A6NI56 674 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 H6PDO95479 791 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CHEK2O96017 543 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 SLC10A3P09131 477 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 BMP1P13497 986 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 PKMP14618 531 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 HOXB8P17481 243 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CTPS1P17812 591 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CORO1AP31146 461 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 TNK2Q07912 1038 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 TAF1AQ15573 450 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CTSL3PQ5NE16 218 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 TRAF7Q6Q0C0 670 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 GPSM1Q86YR5 675 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 OR6K2Q8NGY2 324 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CCDC97Q96F63 343 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 KCTD14Q9BQ13 255 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 TDRD1Q9BXT4 1180 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 TRIM15Q9C019 465 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 EPB41L1Q9H4G0 881 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 POPDC3Q9HBV1 291 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 CCM2LQ9NUG4 571 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 INTS7Q9NVH2 962 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 DUS2Q9NX74 493 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 RNF186Q9NXI6 227 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 PCTPQ9UKL6 214 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 OAZ3Q9UMX2 235 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 DMTF1Q9Y222 760 aa15.55■□□□□ 0.08
ARHGEF40-203ENST00000554514 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SYCE1LA8MT33 242 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 KLKB1P03952 638 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 LPOP22079 712 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 GSK3BP49841 420 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ATP6V0D1P61421 351 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 TXNL4AP83876 142 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 LIPEQ05469 1076 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ZNF177Q13360 481 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 MRPL58Q14197 206 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 AAK1Q2M2I8 961 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 CMTR2Q8IYT2 770 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 DDI1Q8WTU0 396 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 WBP2Q969T9 261 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 RBM38Q9H0Z9 239 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ALG2Q9H553 416 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SOX17Q9H6I2 414 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 OLAHQ9NV23 265 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 PLK2Q9NYY3 685 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 PTTG2Q9NZH5 202 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ASPDHA6ND91 283 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 CA12O43570 354 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SYNCRIPO60506 623 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 RPS17P08708 135 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 IL2P60568 153 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 RALGPS2Q86X27 583 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 MINDY1Q8N5J2 469 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SMOXQ9NWM0 555 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ABCD2Q9UBJ2 740 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ABT1Q9ULW3 272 aaKnown RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 HEMK1Q9Y5R4 338 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 TTC36A6NLP5 189 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SLC22A3O75751 556 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 GUCA1CO95843 209 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 FASP25445 335 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 CDH4P55283 916 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 PRMT9Q6P2P2 845 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 SLC2A7Q6PXP3 512 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 GPRIN3Q6ZVF9 776 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 OFCC1Q8IZS5 231 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ANKFN1Q8N957 763 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 PEX13Q92968 403 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 ZNF599Q96NL3 588 aa15.54■□□□□ 0.08
ARHGEF40-203ENST00000554514 COCHO43405 550 aa15.53■□□□□ 0.08
ARHGEF40-203ENST00000554514 KDELR3O43731 214 aa15.53■□□□□ 0.08
ARHGEF40-203ENST00000554514 ESRRBO95718 433 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms