RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
ACTN1-213ENST00000554508 RSPH14Q9UHP6 348 aa8.63□□□□□ -1.03
ACTN1-213ENST00000554508 ATXN7L1Q9ULK2 861 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-213ENST00000554508 AAR2Q9Y312 384 aaKnown RBP8.63□□□□□ -1.03
ACTN1-213ENST00000554508 PRKAB1Q9Y478 270 aa8.63□□□□□ -1.03
ACTN1-213ENST00000554508 SPO11Q9Y5K1 396 aa8.63□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF106Q9H2Y7 1883 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 PIKFYVEQ9Y2I7 2098 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 IGHV1OR21-1A0A087WYE8 117 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KIR2DS5A0A0G2JLQ3 304 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 A0A0G2JNG1 304 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 GRID2IPA4D2P6 1211 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 GOLGA6L9A6NEM1 432 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KIR2DS3K7RE56 304 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 HGSO14964 777 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 AURKAO14965 403 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KMOO15229 486 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 NVLO15381 856 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KLK10O43240 276 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KCNJ13O60928 360 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 PYGMP11217 842 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ACP5P13686 325 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 F3P13726 295 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF8P17098 575 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 LIMK2P53671 638 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 EIF3EP60228 445 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 PRPSAP1Q14558 356 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KIR2DS5Q14953 304 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SLC1A5Q15758 541 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 AMZ1Q400G9 498 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ANKRD20A2Q5SQ80 823 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 PHF19Q5T6S3 580 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ANKRD20A1Q5TYW2 823 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ANKRD20A3Q5VUR7 823 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ALS2CLQ60I27 953 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 IYDQ6PHW0 289 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 DARS2Q6PI48 645 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 USP53Q70EK8 1073 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 GLT6D1Q7Z4J2 308 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ADGRG6Q86SQ4 1221 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SLC9B2Q86UD5 537 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 LRRTM4Q86VH4 590 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 TTC30BQ8N4P2 665 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SLC25A41Q8N5S1 370 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 IPMKQ8NFU5 416 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 OR4D9Q8NGE8 314 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 BRSK1Q8TDC3 778 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SLC37A2Q8TED4 501 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 LRRC45Q96CN5 670 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 NAF1Q96HR8 494 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SLC38A3Q99624 504 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 FSD1LQ9BXM9 530 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 GBA3Q9H227 469 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SEMA6CQ9H3T2 930 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 BPIFA1Q9NP55 256 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SARS2Q9NP81 518 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 TRMT1Q9NXH9 659 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 KCNK4Q9NYG8 393 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 IL17CQ9P0M4 197 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 ACSL6Q9UKU0 697 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 LOXL2Q9Y4K0 774 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 PCYT1BQ9Y5K3 369 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
ACTN1-213ENST00000554508 BPTFQ12830 3046 aa8.62□□□□□ -1.03
ACTN1-213ENST00000554508 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ITPR1Q14643 2758 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TRBV23OR9-2A0A075B6M9 112 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 IGHV5-10-1A0A0J9YXX1 117 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TEX51A0A1B0GUA7 166 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 PMS2P1A4D2B8 440 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 A6NCN8 305 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 STX7O15400 261 aaKnown RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 KCNN4O15554 427 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 CDK14O94921 469 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 FTCDO95954 541 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 AGTP01019 485 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 SLC4A1P02730 911 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF7P17097 686 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 XRCC1P18887 633 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 CD82P27701 267 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 SLC5A2P31639 672 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 SPAM1P38567 509 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 CHRNA4P43681 627 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 EPHA4P54764 986 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 HHEXQ03014 270 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TMEM115Q12893 351 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 GTF2H3Q13889 308 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ATP13A5Q4VNC0 1218 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 TMEM71Q6P5X7 295 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 RANBP10Q6VN20 620 aa8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-213ENST00000554508 ZNF662Q6ZS27 426 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms