RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 UBA2Q9UBT2 640 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CD300AQ9UGN4 299 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 VPS51Q9UID3 782 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GMEB2Q9UKD1 530 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SNX7Q9UNH6 387 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SIK3Q9Y2K2 1263 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF236Q9UL36 1845 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CACNA1HO95180 2353 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CCT8L1PA6NM43 557 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GSG1L2A8MUP6 293 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 H3BUI4 141 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CXCL11O14625 94 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PER2O15055 1255 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SMAD6O43541 496 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CIDEAO60543 219 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 HSF2BPO75031 334 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PHF2O75151 1096 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PSIP1O75475 530 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 JRKO75564 520 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TOM1L1O75674 476 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PIGNO95427 931 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ERBB2P04626 1255 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 URODP06132 367 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CAPN1P07384 714 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 IFIT1P09914 478 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 UBTFL1P0CB47 393 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ANPEPP15144 967 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CYP2B6P20813 491 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ITGB8P26012 769 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CIITAP33076 1130 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ACSL1P33121 698 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TTKP33981 857 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ME1P48163 572 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SLC9A3P48764 834 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 STARP49675 285 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TKTL1P51854 596 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 NEK3P51956 506 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CACNB3P54284 484 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PSMC5P62195 406 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 HSD11B2P80365 405 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 FPGSQ05932 587 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GIT2Q14161 759 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ASIC2Q16515 512 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 FSCN1Q16658 493 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 KRT24Q2M2I5 525 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TBRG1Q3YBR2 411 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 FAM209BQ5JX69 171 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 C6orf163Q5TEZ5 329 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 IL31Q6EBC2 164 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SHQ1Q6PI26 577 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GADL1Q6ZQY3 521 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TOGARAM2Q6ZUX3 1019 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 NET1Q7Z628 596 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SLFN11Q7Z7L1 901 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ASPGQ86U10 573 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CDR2LQ86X02 465 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SFR1Q86XK3 245 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SLC22A9Q8IVM8 553 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CCDC28AQ8IWP9 274 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CCDC36Q8IYA8 594 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ELMOD2Q8IZ81 293 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CACNA2D3Q8IZS8 1091 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ARHGAP24Q8N264 748 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TERB1Q8NA31 727 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GPR156Q8NFN8 814 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 DNAJC9Q8WXX5 260 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 RUBCNQ92622 972 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 RAD51AP1Q96B01 352 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM43Q96BQ3 446 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SGF29Q96ES7 293 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 RADILQ96JH8 1075 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SLC29A1Q99808 456 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 NEURL2Q9BR09 285 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM62Q9BVG3 475 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GON7Q9BXV9 100 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TTYH3Q9C0H2 523 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 KLK15Q9H2R5 256 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM245Q9H330 911 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 RNPEPQ9H4A4 650 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 DPEP3Q9H4B8 488 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 BCO1Q9HAY6 547 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GALNT9Q9HCQ5 603 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TM9SF3Q9HD45 589 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 IL1RAPL2Q9NP60 686 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PANK4Q9NVE7 773 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SELENONQ9NZV5 590 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 HMG20BQ9P0W2 317 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 CHORDC1Q9UHD1 332 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 GJD2Q9UKL4 321 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 NUP50Q9UKX7 468 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 STX8Q9UNK0 236 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 MTMR6Q9Y217 621 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 POLHQ9Y253 713 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 ERGIC3Q9Y282 383 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 DTX4Q9Y2E6 619 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms