RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TAF1P21675 1872 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 KANSL1LA0AUZ9 987 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 FAM170AA1A519 330 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 FSD2A1L4K1 749 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ANKRD18BA2A2Z9 1011 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 LILRA5A6NI73 299 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 A8MZ25 164 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ANKRD28O15084 1053 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HS6ST1O60243 411 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 DOK2O60496 412 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 GPC4O75487 556 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 OR2C1O95371 312 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HIST1H2ABP04908 130 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ICAM1P05362 532 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HSP90AB1P08238 724 aaKnown RBP4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HLA-DOBP13765 273 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ITGA2P17301 1181 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ANXA7P20073 488 aaKnown RBP4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HIST1H2ADP20671 130 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 TM4SF1P30408 202 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 USP8P40818 1118 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HADHAP40939 763 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 RAD52P43351 418 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 RGS19P49795 217 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 NAP1L1P55209 391 aaKnown RBP4.94□□□□□ -1.62
SCFD1-211ENST00000554437 CLDN20P56880 219 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ISL1P61371 349 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 ITPRIPL1Q6GPH6 555 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 WBP2NLQ6ICG8 309 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 BRINP3Q76B58 766 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HIST3H2AQ7L7L0 130 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 KMT5CQ86Y97 462 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCFD1-211ENST00000554437 HACE1Q8IYU2 909 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 NAGSQ8N159 534 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 DNAAF4Q8WXU2 420 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 AP1M1Q9BXS5 423 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 PLK3Q9H4B4 646 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 SMARCAD1Q9H4L7 1026 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 EPB41L5Q9HCM4 733 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 SH3GLB2Q9NR46 395 aa4.94□□□□□ -1.62
SCFD1-211ENST00000554437 RALYQ9UKM9 306 aaKnown RBP4.94□□□□□ -1.62
SCFD1-211ENST00000554437 DOCK7Q96N67 2140 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 FAM90A26D6RGX4 464 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 RB1P06400 928 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SRPRAP08240 638 aaKnown RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 ACTN1P12814 892 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 CDH1P12830 882 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 UGT1A1P22309 533 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 DGKAP23743 735 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 AMPHP49418 695 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 CAMPP49913 170 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 FUT6P51993 359 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF132P52740 706 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SREBF2Q12772 1141 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 IKQ13123 557 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 ASTE1Q2TB18 679 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 PCGF3Q3KNV8 242 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF718Q3SXZ3 478 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 TMEM35AQ53FP2 167 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 NSUN5P2Q63ZY6 315 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 PMS2CLQ68D20 193 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 KIAA0930Q6ICG6 404 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 PAPD4Q6PIY7 484 aaKnown RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 TSPAN33Q86UF1 283 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 CCDC190Q86UF4 302 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 NR2C2APQ86WQ0 139 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 MAP7D3Q8IWC1 876 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 MAB21L3Q8N8X9 362 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 THAP6Q8TBB0 222 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 LNX1Q8TBB1 728 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SLC38A5Q8WUX1 472 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 CD101Q93033 1021 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 OR2A14Q96R47 310 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 NUDCD1Q96RS6 583 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SMC6Q96SB8 1091 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 PKP4Q99569 1192 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SEMA3CQ99985 751 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 TREX2Q9BQ50 279 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-211ENST00000554437 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 SYNCQ9H7C4 482 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 OGFRQ9NZT2 677 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 OR2W1Q9Y3N9 320 aa4.93□□□□□ -1.62
SCFD1-211ENST00000554437 VILLO15195 856 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 OGG1O15527 345 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 LDB3O75112 727 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 F7P08709 466 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 GABRB1P18505 474 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 KRT20P35900 424 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 CLNS1AP54105 237 aaKnown RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 DRG2P55039 364 aaKnown RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 GTF2H2Q13888 395 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF234Q14588 700 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 SYT16Q17RD7 645 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF672Q499Z4 452 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 CCDC92Q53HC0 331 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 GTF2H2CQ6P1K8 395 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 CLEC17AQ6ZS10 378 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms