RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FOXO6A8MYZ6 492 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 NT5C1B-RDH14C9J2C7 533 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 GOLGA8SH3BPF8 625 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 GOLGA8MH3BSY2 632 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 GOLGA8RI6L899 631 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF701M0R085 212 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SCDO00767 359 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 DVL2O14641 736 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MTSS1O43312 755 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 BUD23O43709 281 aaKnown RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 OPHN1O60890 802 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MAFO75444 373 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 BAG2O95816 211 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 VTNP04004 478 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SP9P0CG40 484 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ETS1P14921 441 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CD19P15391 556 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 VCLP18206 1134 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PGAM1P18669 254 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MIPP30301 263 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PTPN9P43378 593 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SLC1A6P48664 564 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ACOT2P49753 483 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 KPNA2P52292 529 aaKnown RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF135P52742 658 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 AIF1P55008 147 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 NR1H2P55055 460 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MTTPP55157 894 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CDH6P55285 790 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PFKPQ01813 784 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 OGDHQ02218 1023 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 KDSRQ06136 332 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CYLC2Q14093 348 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 DPYSQ14117 519 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 EFTUD2Q15029 972 aaKnown RBP eCLIP5.94□□□□□ -1.468e-9■■■■■ 34.3
VPS33B-203ENST00000554264 PDK3Q15120 406 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 LLGL1Q15334 1064 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MAPRE2Q15555 327 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SPATS1Q496A3 300 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PTPN20Q4JDL3 420 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SPANXN3Q5MJ09 141 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 RABGAP1LQ5R372 815 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 GRTP1Q5TC63 336 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PDZD4Q76G19 769 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SPATA24Q86W54 205 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 C1orf210Q8IVY1 113 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CCDC60Q8IWA6 550 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 UNC45BQ8IWX7 931 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 UNC5BQ8IZJ1 945 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CARFQ8N187 725 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 AFAP1L2Q8N4X5 818 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 DTX3Q8N9I9 347 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 B4GALNT2Q8NHY0 566 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 RP9Q8TA86 221 aaKnown RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 DTX3LQ8TDB6 740 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 AUTS2Q8WXX7 1259 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 TSPAN18Q96SJ8 248 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CPNE1Q99829 537 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 FAM118BQ9BPY3 351 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 WDR83Q9BRX9 315 aaKnown RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CALN1Q9BXU9 219 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 RHOBTB2Q9BYZ6 727 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 BRD8Q9H0E9 1235 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ASB7Q9H672 318 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF696Q9H7X3 374 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 TBC1D17Q9HA65 648 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 PCDH18Q9HCL0 1135 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 KLHL11Q9NVR0 708 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 TBCCD1Q9NVR7 557 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MOCS1Q9NZB8 636 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 CPSF3Q9UKF6 684 aaKnown RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ITGB1BP2Q9UKP3 347 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ANKRD6Q9Y2G4 727 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 DTNAQ9Y4J8 743 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 ARID1BQ8NFD5 2236 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-203ENST00000554264 MAGEB16A2A368 324 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 C2CD4BA6NLJ0 364 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PRR5-ARHGAP8B1AHC4 643 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 NCAM2O15394 837 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 KCNN4O15554 427 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PSMD3O43242 534 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TIMM44O43615 452 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 NARSO43776 548 aaKnown RBP5.93□□□□□ -1.46
VPS33B-203ENST00000554264 PLIN3O60664 434 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TADA2AO75478 443 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 STAMBPO95630 424 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 IL18BPO95998 194 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CLPTM1O96005 669 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 C1QAP02745 245 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 POLBP06746 335 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 GALTP07902 379 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 JMJD7P0C870 316 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 MCF2P10911 925 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 CDC25CP30307 473 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SDC4P31431 198 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 TTKP33981 857 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SERPINB6P35237 376 aa5.93□□□□□ -1.46
VPS33B-203ENST00000554264 SPRP35270 261 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms