RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 H0Y8X5 98 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 STX7O15400 261 aaKnown RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 GP5P40197 560 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 POLD2P49005 469 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PRLHRP49683 370 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 MPP2Q14168 576 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 SMAD1Q15797 465 aaKnown RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CES4AQ5XG92 561 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 KIAA1324Q6UXG2 1013 aaKnown RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CYHR1Q6ZMK1 362 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 EXOC3L1Q86VI1 746 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 LONP2Q86WA8 852 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 LRRC6Q86X45 466 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 OR14C36Q8NHC7 312 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 UHMK1Q8TAS1 419 aaKnown RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 ZNF398Q8TD17 642 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CD200R1Q8TD46 325 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CXorf40AQ8TE69 158 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 DENND1AQ8TEH3 1009 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 NAT14Q8WUY8 206 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 GAB3Q8WWW8 586 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 ULK4Q96C45 1275 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 VPS39Q96JC1 886 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 POPDC3Q9HBV1 291 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 FZD3Q9NPG1 666 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PSMC3IPQ9P2W1 217 aaPredicted RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 ATXN10Q9UBB4 475 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 ARHGEF17Q96PE2 2063 aaPredicted RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 TMEM202A6NGA9 273 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PRR33A8MZF0 331 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PHBP35232 272 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PTGER3P43115 390 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 ABCG1P45844 678 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 FNTBP49356 437 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 NUBP1P53384 320 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CTSCP53634 463 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 DMPKQ09013 629 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 SHBQ15464 509 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 AGBL2Q5U5Z8 902 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CDHR3Q6ZTQ4 885 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 STRA8Q7Z7C7 330 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 NRROSQ86YC3 692 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 DCLK2Q8N568 766 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 OR6Y1Q8NGX8 325 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 BTBD1Q9H0C5 482 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 VPS37BQ9H9H4 285 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 SSU72Q9NP77 194 aaKnown RBP6.68□□□□□ -1.34
LINC00517-202ENST00000554257 KCTD5Q9NXV2 234 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 GRID1Q9ULK0 1009 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 CA5BQ9Y2D0 317 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 PI4KAP42356 2102 aa6.68□□□□□ -1.34
LINC00517-202ENST00000554257 A6NCN8 305 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 TOR1BO14657 336 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 AXIN1O15169 862 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 GPC4O75487 556 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 TOP3BO95985 862 aaKnown RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ZNF8P17098 575 aaPredicted RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PAMP19021 973 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 AOAHP28039 575 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ETV4P43268 484 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 EIF2B5Q13144 721 aaKnown RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 SRSF5Q13243 272 aaKnown RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PDE1CQ14123 709 aaPredicted RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 INPP5AQ14642 412 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ACOX1Q15067 660 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PCM1Q15154 2024 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 LYPLAL1Q5VWZ2 237 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 CASC4Q6P4E1 433 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 CERS6Q6ZMG9 384 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PIM3Q86V86 326 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 NDUFAF2Q8N183 169 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 BANPQ8N9N5 519 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ANKRD49Q8WVL7 239 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 AP2M1Q96CW1 435 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 MENTQ9BUN1 341 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 NSMCE4AQ9NXX6 385 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 KLHL42Q9P2K6 505 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ANKRD12Q6UB98 2062 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 EXOC1LA0A1B0GW35 172 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 SLC5A10A0PJK1 596 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 FAM86C2PA6NEL3 165 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 DHRS4L1P0CG22 281 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 TPBGLP0DKB5 382 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 HNRNPA2B1P22626 353 aaKnown RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 CCR7P32248 378 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 NUDT1P36639 197 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 TTPAP49638 278 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 IRF9Q00978 393 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 TCF15Q12870 199 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ITGA9Q13797 1035 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 LRRC14Q15048 493 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PPP1R3AQ16821 1122 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ZXDCQ2QGD7 858 aaPredicted RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 HECTD2Q5U5R9 776 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 ATG14Q6ZNE5 492 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 FAM124AQ86V42 546 aa6.67□□□□□ -1.34
LINC00517-202ENST00000554257 PLD6Q8N2A8 252 aaKnown RBP6.67□□□□□ -1.34
LINC00517-202ENST00000554257 HIC2Q96JB3 615 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms