RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 BNIP3Q12983 259 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 C8orf82Q6P1X6 216 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PHYKPLQ8IUZ5 450 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 OR2T11Q8NH01 316 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 RDH11Q8TC12 318 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 CALML6Q8TD86 181 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 TWIST2Q8WVJ9 160 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 TFAP2CQ92754 450 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ISOC1Q96CN7 298 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 TUBGCP3Q96CW5 907 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 MARCH7Q9H992 704 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 RGS18Q9NS28 235 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 RAD54BQ9Y620 910 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 LINC00854A0A1B0GVQ3 168 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 MAGEB16A2A368 324 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 OR1I1O60431 355 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 NPHS1O60500 1241 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 IL12AP29459 219 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PSEN2P49810 448 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SQLEQ14534 574 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 RFTN1Q14699 578 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 USP41Q3LFD5 358 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PERM1Q5SV97 790 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 CXCL17Q6UXB2 119 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 BORCS5Q969J3 196 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SMARCD1Q96GM5 515 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SLC9A7Q96T83 725 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 C2orf49Q9BVC5 232 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 FNDC1Q4ZHG4 1894 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 MYO16Q9Y6X6 1858 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SMIM35A0A1B0GVV1 85 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 TNPO2O14787 897 aaKnown RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 ARPC2O15144 300 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ACOX3O15254 700 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ICMTO60725 284 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 THP07101 528 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ZNF12P17014 697 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SLC7A1P30825 629 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PNPLA4P41247 253 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 ALDH3B2P48448 385 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 PIK3CGP48736 1102 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 CDK9P50750 372 aaKnown RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 TPTEP56180 551 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 NUP107P57740 925 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 HERC3Q15034 1050 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SLC16A10Q8TF71 515 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 CARS2Q9HA77 564 aaKnown RBP12.03□□□□□ -0.48
SPTB-206ENST00000553938 MYRFQ9Y2G1 1151 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 MED16Q9Y2X0 877 aa12.03□□□□□ -0.48
SPTB-206ENST00000553938 UBA6A0AVT1 1052 aaPredicted RBP12.02□□□□□ -0.48
SPTB-206ENST00000553938 TRPC5OSA6NMA1 111 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 H2AFYO75367 372 aaKnown RBP12.02□□□□□ -0.48
SPTB-206ENST00000553938 GMNNO75496 209 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 CHRNA1P02708 482 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 APOA4P06727 396 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 GRIK1P39086 918 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 UPP1Q16831 310 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 RGS21Q2M5E4 152 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 PLEKHG6Q3KR16 790 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 CTRCQ99895 268 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 OSBPL11Q9BXB4 747 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 PRDM8Q9NQV8 689 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 ERVK-11Q9UQG0 969 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 DOCK4Q8N1I0 1966 aa12.02□□□□□ -0.48
SPTB-206ENST00000553938 REV3LO60673 3130 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 A0A0D9SEW6 157 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 RNF103-CHMP3A0A140T963 221 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 CCDC162PA2VCL2 907 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 LDB2O43679 373 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 CCNCP24863 283 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 HMOX2P30519 316 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 RGRP47804 291 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 ZFP36L2P47974 494 aaKnown RBP12.02□□□□□ -0.49
SPTB-206ENST00000553938 HK2P52789 917 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 RPS3AP61247 264 aaKnown RBP12.02□□□□□ -0.49
SPTB-206ENST00000553938 TUBA1BP68363 451 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.49
SPTB-206ENST00000553938 CYP51A1Q16850 503 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 ITIH5Q86UX2 942 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 CADM3Q8N126 398 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 OR2T34Q8NGX1 318 aa12.02□□□□□ -0.49
SPTB-206ENST00000553938 OR2T3Q8NH03 318 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms