RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SLC41A2Q96JW4 573 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 MCCC1Q96RQ3 725 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 RMI1Q9H9A7 625 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 LATS2Q9NRM7 1088 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 FGF21Q9NSA1 209 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 SCHIP1Q9P0W5 487 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 EPHA6Q9UF33 1036 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 TCFL5Q9UL49 500 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 FZD10Q9ULW2 581 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 NAV3Q8IVL0 2385 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 IGHV5-51A0A0C4DH38 117 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 SCRG1O75711 98 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 ALPPP05187 535 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 MMEP08473 750 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 RAB40ALP0C0E4 278 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 CTPS1P17812 591 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 TPI1P60174 286 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 PTSQ03393 145 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 IL10RBQ08334 325 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 LRRC66Q68CR7 880 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 Q6ZS92 163 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 ZADH2Q8N4Q0 377 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 UBXN4Q92575 508 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF514Q96K75 400 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 MLPHQ9BV36 600 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 NLNQ9BYT8 704 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 SEMA5BQ9P283 1151 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF624Q9P2J8 865 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-204ENST00000553605 MAN1B1Q9UKM7 699 aa13.58□□□□□ -0.24
PRPF39-204ENST00000553605 DFFAO00273 331 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 GRID2O43424 1007 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 STSP08842 583 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 EBLN1P0CF75 366 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 KRT3P12035 628 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 EDN3P14138 238 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 COX6B1P14854 86 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 GPD1P21695 349 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 MMP8P22894 467 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 CA5AP35218 305 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-204ENST00000553605 CLCNKAP51800 687 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 TRAF2Q12933 501 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 ATP1A4Q13733 1029 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF235Q14590 738 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
PRPF39-204ENST00000553605 LLGL1Q15334 1064 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 MIIPQ5JXC2 388 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 LCN10Q6JVE6 187 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 ARHGAP36Q6ZRI8 547 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
PRPF39-204ENST00000553605 TMEM126BQ8IUX1 230 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 SLC38A9Q8NBW4 561 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 RAB33BQ9H082 229 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 OSGEPL1Q9H4B0 414 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 CHST11Q9NPF2 352 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 HOOK1Q9UJC3 728 aaKnown RBP13.57□□□□□ -0.24
PRPF39-204ENST00000553605 CNOT6Q9ULM6 557 aaKnown RBP13.57□□□□□ -0.24
PRPF39-204ENST00000553605 SIK3Q9Y2K2 1263 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 PPIL1Q9Y3C6 166 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 FBN3Q75N90 2809 aa13.57□□□□□ -0.24
PRPF39-204ENST00000553605 MEN1O00255 615 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 E2F3O00716 465 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 KLHL41O60662 606 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 PGLSO95336 258 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 JCHAINP01591 159 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 BPIP17213 487 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 HTR7P34969 479 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 ARL4DP49703 201 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 AIF1P55008 147 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 GSDMDP57764 484 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 ARMC12Q5T9G4 340 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 TRIM8Q9BZR9 551 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 KCND1Q9NSA2 647 aa13.56□□□□□ -0.24
PRPF39-204ENST00000553605 NIPBLQ6KC79 2804 aaeCLIP13.56□□□□□ -0.24
PRPF39-204ENST00000553605 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 NUAK1O60285 661 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
PRPF39-204ENST00000553605 HOXB4P17483 251 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-204ENST00000553605 PPP1CAP62136 330 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 GPR18Q14330 331 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 PLEKHS1Q5SXH7 462 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 PARP9Q8IXQ6 854 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 DSELQ8IZU8 1212 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms