RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 CERCAMQ5T4B2 595 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 XKR5Q6UX68 686 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 ARL14Q8N4G2 192 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 RASGEF1AQ8N9B8 481 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 MAIP1Q8WWC4 291 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 DNAJC1Q96KC8 554 aaKnown RBP11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 AP1M1Q9BXS5 423 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 RAB6BQ9NRW1 208 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 SMOXQ9NWM0 555 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 PAK5Q9P286 719 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 TBC1D29Q9UFV1 150 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 FEZ2Q9UHY8 353 aaPredicted RBP11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 APPL1Q9UKG1 709 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 SNX12Q9UMY4 172 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 NEU2Q9Y3R4 380 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 PKP3Q9Y446 797 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 PCDHB1Q9Y5F3 818 aa11.73□□□□□ -0.53
LMBR1L-228ENST00000552879 TRBV23OR9-2A0A075B6M9 112 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 TCRBV7S3A2A0A539 114 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 B4GAT1O43505 415 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 VEGFDO43915 354 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 KIF5CO60282 957 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 SRP72O76094 671 aaKnown RBP11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CDK14O94921 469 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 PRAMEF1O95521 474 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CRTAMO95727 393 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 PROS1P07225 676 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 GLB1P16278 677 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 ARSDP51689 593 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CLCNKAP51800 687 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CCL7P80098 99 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 POU6F1Q14863 301 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CYP1B1Q16678 543 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CRTC3Q6UUV7 619 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 TMPRSS9Q7Z410 1059 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 ZNF438Q7Z4V0 828 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 DDHD1Q8NEL9 900 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 ACTRT1Q8TDG2 376 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 NAT6Q93015 286 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 ZNF778Q96MU6 729 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 C19orf43Q9BQ61 176 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 FAM96AQ9H5X1 160 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 NLE1Q9NVX2 485 aaPredicted RBP11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 SCHIP1Q9P0W5 487 aaPredicted RBP11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 CLCA2Q9UQC9 943 aa11.72□□□□□ -0.53
LMBR1L-228ENST00000552879 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 LAMA5O15230 3695 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 TRBV5-4A0A0C4DH59 114 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 CCDC78A2IDD5 438 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 GPR89AB7ZAQ6 455 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 H7C0S8 307 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 NUDT21O43809 227 aaKnown RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 GPR89BP0CG08 455 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 PNLIPP16233 465 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 ZNF7P17097 686 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 CDH17Q12864 832 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 NFATC2Q13469 925 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 ITGA9Q13797 1035 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 NR1D2Q14995 579 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 TRIP13Q15645 432 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 PLA2G4EQ3MJ16 856 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 PAPD7Q5XG87 772 aaKnown RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 ZNF534Q76KX8 674 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 LINC00523Q86TU6 105 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 LRRTM4Q86VH4 590 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 SFRP1Q8N474 314 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 CCDC89Q8N998 374 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 Q8N9G6 341 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 OR13J1Q8NGT2 312 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 MDM1Q8TC05 714 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 SLC37A2Q8TED4 501 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 CDKN2AIPNLQ96HQ2 116 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 ASB8Q9H765 288 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 PRDM8Q9NQV8 689 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 HOMER3Q9NSC5 361 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 KLC4Q9NSK0 619 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 SLC2A6Q9UGQ3 507 aa11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
LMBR1L-228ENST00000552879 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.54
LMBR1L-228ENST00000552879 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
LMBR1L-228ENST00000552879 OR51F1A6NGY5 319 aa11.7□□□□□ -0.54
LMBR1L-228ENST00000552879 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
LMBR1L-228ENST00000552879 CES2O00748 559 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms