RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 C10orf107Q8IVU9 208 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 CACNA2D3Q8IZS8 1091 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 TRAM1L1Q8N609 369 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-224ENST00000552812 SCYL1Q96KG9 808 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 GABRG3Q99928 467 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 ZSCAN5AQ9BUG6 496 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 ZDHHC3Q9NYG2 299 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 LIMD1Q9UGP4 676 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 FAM50BQ9Y247 325 aa11.18□□□□□ -0.62
CACNB3-224ENST00000552812 IGLV3-16A0A075B6K0 115 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 E5RI56 91 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SPINT1O43278 529 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 TRIM13O60858 407 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SNNO75324 88 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 TGDSO95455 350 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 ADH1BP00325 375 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SBK3P0C264 359 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 FGF3P11487 239 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 UGT1A6P19224 532 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 UGT1A1P22309 533 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 UGT1A4P22310 534 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 NTSR1P30989 418 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 UGT1A3P35503 534 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 UGT1A5P35504 534 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 GLRBP48167 497 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 PSMD8P48556 350 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 METAP1P53582 386 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 CREB5Q02930 508 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 CCDC15Q0P6D6 951 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 BST1Q10588 318 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 GRSF1Q12849 480 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 STX3Q13277 289 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 ZNF284Q2VY69 593 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SETMARQ53H47 684 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 TECRLQ5HYJ1 363 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 MACC1Q6ZN28 852 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 RFLNAQ6ZTI6 216 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 Q6ZVL8 140 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 OTOAQ7RTW8 1153 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 TRMT11Q7Z4G4 463 aaKnown RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SPATA21Q7Z572 469 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 NKAPQ8N5F7 415 aaKnown RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 ANKS4BQ8N8V4 417 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 OR6Y1Q8NGX8 325 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 PPP1R14CQ8TAE6 165 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 HLA-CQ95604 372 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 CCDC126Q96EE4 140 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SEC16BQ96JE7 1060 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 COPS8Q99627 209 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 GPR21Q99679 349 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 ELAC2Q9BQ52 826 aaKnown RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 SPATA16Q9BXB7 569 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 DERL2Q9GZP9 239 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 OXSMQ9NWU1 459 aa11.17□□□□□ -0.62
CACNB3-224ENST00000552812 CPSF2Q9P2I0 782 aaKnown RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 TRMT6Q9UJA5 497 aaKnown RBP11.17□□□□□ -0.62
CACNB3-224ENST00000552812 ANTXRLA6NF34 631 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 EBAG9O00559 213 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 WNT9AO14904 365 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 NIPSNAP2O75323 286 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 RALBP11234 206 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CD1DP15813 335 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CHRM3P20309 590 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 C5AR1P21730 350 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 ETV3P41162 512 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 P2RY2P41231 377 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 LIG3P49916 1009 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 ATP6V0D1P61421 351 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 SATB1Q01826 763 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 OCRLQ01968 901 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 ASPHQ12797 758 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 STARD3Q14849 445 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CST6Q15828 149 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CCDC85BQ15834 202 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-224ENST00000552812 TMEM52BQ4KMG9 183 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 PTRHD1Q6GMV3 140 aaKnown RBP11.16□□□□□ -0.62
CACNB3-224ENST00000552812 PAQR3Q6TCH7 311 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 ZNF765Q7L2R6 523 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 SPATS2Q86XZ4 545 aaKnown RBP11.16□□□□□ -0.62
CACNB3-224ENST00000552812 SPATA6LQ8N4H0 392 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 OR2T3Q8NH03 318 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 RHEBL1Q8TAI7 183 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 DTD2Q96FN9 168 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 COQ10AQ96MF6 247 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 VPS35Q96QK1 796 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
CACNB3-224ENST00000552812 BOCQ9BWV1 1114 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 TFB2MQ9H5Q4 396 aaKnown RBP11.16□□□□□ -0.62
CACNB3-224ENST00000552812 ZDHHC4Q9NPG8 344 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 HEBP1Q9NRV9 189 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 DHRS7Q9Y394 339 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 PLXNB3Q9ULL4 1909 aa11.16□□□□□ -0.62
CACNB3-224ENST00000552812 AP1G1O43747 822 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms