RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SLC38A9Q8NBW4 561 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 FAM98AQ8NCA5 519 aaKnown RBP4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 SEMA6DQ8NFY4 1073 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 GRAPLQ8TC17 118 aaPredicted RBP4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 HASPINQ8TF76 798 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 APBB2Q92870 758 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 PDLIM5Q96HC4 596 aaKnown RBP4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 GRAMD2BQ96HH9 432 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 SIGLEC11Q96RL6 698 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 SLC22A12Q96S37 553 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 INTS14Q96SY0 518 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 DDOQ99489 341 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 SH3GL2Q99962 352 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 FERMT1Q9BQL6 677 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 HAUS8Q9BT25 410 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 SPRY4Q9C004 299 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 MMADHCQ9H3L0 296 aaPredicted RBP4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 EQTNQ9NQ60 294 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 TAS2R14Q9NYV8 317 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 DBNLQ9UJU6 430 aaKnown RBP4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 FRMD4BQ9Y2L6 1034 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 KCNK7Q9Y2U2 307 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
LSM6P2-201ENST00000552208 GAGE12JA6NER3 117 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM191CA6NGB0 347 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF814B7Z6K7 855 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 H0YIN7 160 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 TRIM77I1YAP6 450 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PTGESO14684 152 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SLC30A4O14863 429 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 IFIT3O14879 490 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 IPO8O15397 1037 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 CNOT3O75175 753 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PROP1O75360 226 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 DDNO94850 711 aaPredicted RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 KCNK5O95279 499 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 GCP02774 474 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SNRNP70P08621 437 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 FAM58BPP0C7Q3 252 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 VPREB1P12018 145 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PDGFRAP16234 1089 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 GJA1P17302 382 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 CHRNB2P17787 502 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 GNLYP22749 145 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PTPN3P26045 913 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PCGF2P35227 344 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ATP6V1E1P36543 226 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PIGAP37287 484 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 APOBEC1P41238 236 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PRKCIP41743 596 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ME1P48163 572 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 RPS13P62277 151 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 COASYQ13057 564 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ITGA7Q13683 1181 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 NEDD9Q14511 834 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 LASP1Q14847 261 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 DECR1Q16698 335 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SYT16Q17RD7 645 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ZXDCQ2QGD7 858 aaPredicted RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SMU1Q2TAY7 513 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ANKRD20A4Q4UJ75 823 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ANKRD20A8PQ5CZ79 823 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 GLRA4Q5JXX5 417 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ANKRD20A2Q5SQ80 823 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ANKRD20A1Q5TYW2 823 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ANKRD20A3Q5VUR7 823 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF449Q6P9G9 518 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 OLFML1Q6UWY5 402 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 C15orf39Q6ZRI6 1047 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ATG9AQ7Z3C6 839 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 CAMK1DQ8IU85 385 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 FOXRED2Q8IWF2 684 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 FBXO39Q8N4B4 442 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 C10orf53Q8N6V4 93 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SPC24Q8NBT2 197 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ATAD1Q8NBU5 361 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SLC44A5Q8NCS7 719 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ENGASEQ8NFI3 743 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 BBS10Q8TAM1 723 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SLC35F5Q8WV83 523 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 RSPH1Q8WYR4 309 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 KRT35Q92764 455 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 EXT2Q93063 718 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 EXOC4Q96A65 974 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 RHBDF1Q96CC6 855 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 NXNL1Q96CM4 212 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 CCDC43Q96MW1 224 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF558Q96NG5 402 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ATP6V0BQ99437 205 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 PRRX2Q99811 253 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 TMEM79Q9BSE2 394 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 FZD8Q9H461 694 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 MRPL44Q9H9J2 332 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 CLK4Q9HAZ1 481 aaKnown RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 SEBOXQ9HB31 216 aaPredicted RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 MSRB1Q9NZV6 116 aa4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 LEF1Q9UJU2 399 aaPredicted RBP4.02□□□□□ -1.77
LSM6P2-201ENST00000552208 RCOR1Q9UKL0 485 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms