RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 BMPERQ8N8U9 685 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ATL2Q8NHH9 583 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF564Q8TBZ8 553 aaPredicted RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 KIAA1524Q8TCG1 905 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 AP2M1Q96CW1 435 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 RTP4Q96DX8 246 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 AHCYL2Q96HN2 611 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 DMRTB1Q96MA1 342 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 OR2M4Q96R27 311 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 NUDCD1Q96RS6 583 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC38A3Q99624 504 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 NRTNQ99748 197 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 GSX2Q9BZM3 304 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 PCDH18Q9HCL0 1135 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 PARVAQ9NVD7 372 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 GEMIN8Q9NWZ8 242 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 LUZP4Q9P127 313 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ANKMY1Q9P2S6 941 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC23A2Q9UGH3 650 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 PILRAQ9UKJ1 303 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ACSL6Q9UKU0 697 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 TP53TG5Q9Y2B4 290 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 DNAJC16Q9Y2G8 782 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC30A1Q9Y6M5 507 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 BLACEA4D250 179 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 CAPN8A6NHC0 703 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 H3BRJ5 948 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TOR1BO14657 336 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GPR39O43194 453 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 DNAJC6O75061 913 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 PPFIA2O75334 1257 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 KATNA1O75449 491 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 SASH3O75995 380 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 RNF8O76064 485 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 STK17BO94768 372 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 PRLP01236 227 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 ITGB2P05107 769 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 HLA-DQB2P05538 268 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TPM2P07951 284 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 HOXC4P09017 264 aaPredicted RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 PNLIPP16233 465 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 FERP16591 822 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 MX2P20592 715 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 KELP23276 732 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 SUOXP51687 545 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 AP1S1P61966 158 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 RPS18P62269 152 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 MYL5Q02045 173 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GBE1Q04446 702 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 FOXM1Q08050 763 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 NSUN2Q08J23 767 aaKnown RBP eCLIP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 SLC10A2Q12908 348 aaPredicted RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GALNT3Q14435 633 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 KCNAB1Q14722 419 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GRM3Q14832 879 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 KHDC1Q4VXA5 237 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TDRD12Q587J7 1177 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 FAM199XQ6PEV8 388 aaPredicted RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TMCO3Q6UWJ1 677 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GALNT13Q8IUC8 556 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 ATPAF2Q8N5M1 289 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 AGBL5Q8NDL9 886 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 OR4D9Q8NGE8 314 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 HCAR2Q8TDS4 363 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 EID2BQ96D98 161 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 SCRN2Q96FV2 425 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TGM7Q96PF1 710 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 ERGIC2Q96RQ1 377 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 MGME1Q9BQP7 344 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 THAP2Q9H0W7 228 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 OR2AG1Q9H205 316 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 OSGEPL1Q9H4B0 414 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 GPN2Q9H9Y4 310 aaPredicted RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 TRNAU1APQ9NX07 287 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 OGFRQ9NZT2 677 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 PHTF1Q9UMS5 762 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 SHOC2Q9UQ13 582 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 MYO9AB2RTY4 2548 aa6.77□□□□□ -1.33
PRPF40B-214ENST00000551320 CXorf51AA0A1B0GTR3 108 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 OR52A4PA6NMU1 304 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 KCNK1O00180 336 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 AURKAO14965 403 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 BUD23O43709 281 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TIAF1O95411 115 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 IVLP07476 585 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 MMP2P08253 660 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 KRT7P08729 469 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 BMP4P12644 408 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ZNF8P17098 575 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 NFKB1P19838 968 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 RPL10P27635 214 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 CD86P42081 329 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 CCR10P46092 362 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ARCN1P48444 511 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 STC1P52823 247 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms