RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZNF8P17098 575 aaPredicted RBP22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 KDELR1P24390 212 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 CASRP41180 1078 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 DCDC1P59894 354 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 PPIDQ08752 370 aaKnown RBP22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 AP1B1Q10567 949 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 IHHQ14623 411 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 TMEM26Q6ZUK4 368 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 NT5DC3Q86UY8 548 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 LRRTM4Q86VH4 590 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 TRAM1L1Q8N609 369 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 STARD8Q92502 1023 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 RNF157Q96PX1 679 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 PLEKHG4BQ96PX9 1271 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 TBC1D10AQ9BXI6 508 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 GPR63Q9BZJ6 419 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 XPO4Q9C0E2 1151 aaKnown RBP22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 MAGEE1Q9HCI5 957 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 DTLQ9NZJ0 730 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 PCYT1BQ9Y5K3 369 aaPredicted RBP22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 PDZK1P1A8MUH7 402 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 KCNK1O00180 336 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 UBXN7O94888 489 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 TPM3P06753 285 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 ZFXP17010 805 aaPredicted RBP22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 VCLP18206 1134 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 IFI35P80217 286 aaPredicted RBP22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 GALNT3Q14435 633 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 PDK1Q15118 436 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 DEFB109BQ30KR1 87 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 ALS2CLQ60I27 953 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 C16orf46Q6P387 395 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 RBM12BQ8IXT5 1001 aaKnown RBP22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 UNC5BQ8IZJ1 945 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 PQLC3Q8N755 202 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 GLYATL1Q969I3 302 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 C9orf72Q96LT7 481 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 ULBP3Q9BZM4 244 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 APMAPQ9HDC9 416 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 KCTD3Q9Y597 815 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 HEY1Q9Y5J3 304 aa22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.76■■□□□ 1.231e-8■□□□□ 10.2
SMARCD1-209ENST00000550477 MN1Q10571 1320 aaPredicted RBP22.76■■□□□ 1.23
SMARCD1-209ENST00000550477 PPP1R12AO14974 1030 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 VEGFDO43915 354 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 RASSF9O75901 435 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 TNNT3P45378 269 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 UBE2IP63279 158 aaKnown RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 SLC10A2Q12908 348 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 IL11RAQ14626 422 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 SKIDA1Q1XH10 827 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 COLEC12Q5KU26 742 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 C6orf15Q6UXA7 325 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 TIPARPQ7Z3E1 657 aaKnown RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 LRRN4Q8WUT4 740 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 BRD8Q9H0E9 1235 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 DEF6Q9H4E7 631 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 ZNF71Q9NQZ8 489 aaPredicted RBP22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 POT1Q9NUX5 634 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 SHOC2Q9UQ13 582 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 RPS6KL1Q9Y6S9 549 aa22.75■■□□□ 1.23
SMARCD1-209ENST00000550477 LRRD1A4D1F6 860 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CHUKO15111 745 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CDK14O94921 469 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 DLGAP3O95886 979 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 C9P02748 559 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 MMP2P08253 660 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CCNYL3P0C7X3 344 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 ZNF7P17097 686 aaPredicted RBP22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 IDSP22304 550 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 PBX1P40424 430 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 STAT5AP42229 794 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 TAS2R40P59535 323 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CDK18Q07002 472 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 GTF2H3Q13889 308 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CRTC3Q6UUV7 619 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 TMC3Q7Z5M5 1100 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 ADGRG6Q86SQ4 1221 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 VSIG1Q86XK7 387 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 RASGRP3Q8IV61 690 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 GPR26Q8NDV2 337 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CXorf40BQ96DE9 158 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 STAMBPL1Q96FJ0 436 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 ZDHHC12Q96GR4 267 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 TTC25Q96NG3 672 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 TGM7Q96PF1 710 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 TIMM29Q9BSF4 260 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 EPN3Q9H201 632 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 CBX8Q9HC52 389 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 ARFGAP3Q9NP61 516 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 NFKBIL1Q9UBC1 381 aaPredicted RBP22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 KCND3Q9UK17 655 aa22.74■■□□□ 1.23
SMARCD1-209ENST00000550477 ZNF487B1APH4 448 aa22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 APOL1O14791 398 aa22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 SLC4A1P02730 911 aa22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 TYRP1P17643 537 aa22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 LACTB2Q53H82 288 aaPredicted RBP22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 BZW1Q7L1Q6 419 aaKnown RBP22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 BRSK1Q8TDC3 778 aa22.73■■□□□ 1.23
SMARCD1-209ENST00000550477 IMP4Q96G21 291 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms