RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MC1RQ01726 317 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 MAP7Q14244 749 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 NR1I3Q14994 352 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-205ENST00000550013 KCTD6Q8NC69 237 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 CCNYQ8ND76 341 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 CCHCR1Q8TD31 782 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 TGM7Q96PF1 710 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 ZNF670Q9BS34 389 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 SPATA16Q9BXB7 569 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 ULBP3Q9BZM4 244 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 BRD8Q9H0E9 1235 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 HAUS2Q9NVX0 235 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 TMEM63CQ9P1W3 806 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 PLAAQ9Y263 795 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 TP53TG5Q9Y2B4 290 aa15.2■□□□□ 0.02
RAB5C-205ENST00000550013 CLEC18AA5D8T8 446 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 RGSL1A5PLK6 1076 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 PRR19A6NJB7 356 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 K7EM74 188 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 KCNK1O00180 336 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 SLC25A14O95258 325 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 SLC4A1P02730 911 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 FURINP09958 794 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 DLSTP36957 453 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 NOP2P46087 812 aaKnown RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 LEPRP48357 1165 aaKnown RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 SEPHS1P49903 392 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CLCNKAP51800 687 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 ZBTB17Q13105 803 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 NFKBIBQ15653 356 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CRTC2Q53ET0 693 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 ZNF569Q5MCW4 686 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 C6orf15Q6UXA7 325 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CLEC18BQ6UXF7 455 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 TMEM26Q6ZUK4 368 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 ADGRG6Q86SQ4 1221 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CCDC13Q8IYE1 715 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CNTD1Q8N815 330 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 AVL9Q8NBF6 648 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CLEC18CQ8NCF0 446 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 GALNT6Q8NCL4 622 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 GPR26Q8NDV2 337 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 HDAC11Q96DB2 347 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 ELMO2Q96JJ3 720 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 ZNF624Q9P2J8 865 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-205ENST00000550013 CROTQ9UKG9 612 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 SHOC2Q9UQ13 582 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 DNAJC16Q9Y2G8 782 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 KCNMB2Q9Y691 235 aa15.19■□□□□ 0.02
RAB5C-205ENST00000550013 TEX15Q9BXT5 2789 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
RAB5C-205ENST00000550013 MTA2O94776 668 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 UBXN7O94888 489 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 MBD3O95983 291 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SERPINC1P01008 464 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 VIPP01282 170 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SERPING1P05155 500 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 AMD1P17707 334 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-205ENST00000550013 MX2P20592 715 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SLC19A1P41440 591 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SEPT6Q14141 434 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 PDK2Q15119 407 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SEPT7Q16181 437 aaKnown RBP15.18■□□□□ 0.02
RAB5C-205ENST00000550013 INSCQ1MX18 579 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 TRIM48Q8IWZ4 208 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 FAF2Q96CS3 445 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 OR6C1Q96RD1 312 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 ADGRE3Q9BY15 652 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 CEP41Q9BYV8 373 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 UCK1Q9HA47 277 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 ZFYVE1Q9HBF4 777 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 TRIM39Q9HCM9 518 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 KCTD3Q9Y597 815 aa15.18■□□□□ 0.02
RAB5C-205ENST00000550013 BZW2Q9Y6E2 419 aaKnown RBP15.18■□□□□ 0.02
RAB5C-205ENST00000550013 SPTBN1Q01082 2364 aaKnown RBP15.17■□□□□ 0.02
RAB5C-205ENST00000550013 A0A1W2PQJ5 194 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 CHUKO15111 745 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 MTX2O75431 263 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 KATNA1O75449 491 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 RASSF9O75901 435 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 KIAA0754O94854 1291 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 PROSCO94903 275 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 BRAFP15056 766 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 ZNF7P17097 686 aaPredicted RBP15.17■□□□□ 0.02
RAB5C-205ENST00000550013 ERV3-1Q14264 604 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 KHDC1Q4VXA5 237 aaKnown RBP15.17■□□□□ 0.02
RAB5C-205ENST00000550013 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
RAB5C-205ENST00000550013 TMEM135Q86UB9 458 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 RSC1A1Q92681 617 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 SYN2Q92777 582 aaPredicted RBP15.17■□□□□ 0.02
RAB5C-205ENST00000550013 GLYATL1Q969I3 302 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 STAMBPL1Q96FJ0 436 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 TRIB3Q96RU7 358 aa15.17■□□□□ 0.02
RAB5C-205ENST00000550013 ZSCAN5AQ9BUG6 496 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms