RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 TECPR1Q7Z6L1 1165 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 RAVER1Q8IY67 606 aaKnown RBP12.08□□□□□ -0.48
DDX54-206ENST00000549271 TEX26Q8N6G2 289 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 PQLC3Q8N755 202 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 KCTD6Q8NC69 237 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 PDCD6IPQ8WUM4 868 aaKnown RBP12.08□□□□□ -0.48
DDX54-206ENST00000549271 RAPGEF5Q92565 580 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 FAF2Q96CS3 445 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 TRIM55Q9BYV6 548 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 MTORP42345 2549 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 NPIPB15A6NHN6 443 aaPredicted RBP12.07□□□□□ -0.48
DDX54-206ENST00000549271 A8MU76 341 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 MFSD11O43934 449 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 FZD6O60353 706 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 RECKO95980 971 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 SOD1P00441 154 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 KDELR1P24390 212 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
DDX54-206ENST00000549271 SERPINB6P35237 376 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 GJC1P36383 396 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 ADCY8P40145 1251 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 ARHGAP25P42331 645 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 GNPDA1P46926 289 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 CTBSQ01459 385 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 SLC10A2Q12908 348 aaPredicted RBP12.07□□□□□ -0.48
DDX54-206ENST00000549271 BIRC2Q13490 618 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 PAFAH1B3Q15102 231 aaKnown RBP12.07□□□□□ -0.48
DDX54-206ENST00000549271 PDK2Q15119 407 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 TCEAL1Q15170 157 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 ARMC12Q5T9G4 340 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 MARC1Q5VT66 337 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
DDX54-206ENST00000549271 NCBP2-AS2Q69YL0 99 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 ADAMTSL4Q6UY14 1074 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 Q6ZVL8 140 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 USP45Q70EL2 814 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 ZNF765Q7L2R6 523 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 NSMCE1Q8WV22 266 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 PIH1D2Q8WWB5 315 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 SLC29A3Q9BZD2 475 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 CROTQ9UKG9 612 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 INTUQ9ULD6 942 aa12.07□□□□□ -0.48
DDX54-206ENST00000549271 CROCCQ5TZA2 2017 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 DIDO1Q9BTC0 2240 aaKnown RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 CDC14CA4D256 554 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 PYGLP06737 847 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 MMP13P45452 471 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 FASLGP48023 281 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 ZNF75DP51815 510 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 PGDP52209 483 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 GALNT2Q10471 571 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 ALG1LQ6GMV1 187 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 RAET1GQ6H3X3 334 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 SLC30A9Q6PML9 568 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 ZC3H18Q86VM9 953 aaKnown RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 RHOT2Q8IXI1 618 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 ATPAF2Q8N5M1 289 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 Q8NA96 180 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 FATE1Q969F0 183 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 C5orf34Q96MH7 638 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 ZNF670Q9BS34 389 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 SIDT1Q9NXL6 827 aaKnown RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 SLC5A6Q9Y289 635 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 PCDHGA9Q9Y5G4 932 aaKnown RBP12.06□□□□□ -0.48
DDX54-206ENST00000549271 PCDHGA6Q9Y5G7 932 aa12.06□□□□□ -0.48
DDX54-206ENST00000549271 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
DDX54-206ENST00000549271 INPP4BO15327 924 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 HNRNPRO43390 633 aaKnown RBP12.05□□□□□ -0.48
DDX54-206ENST00000549271 CREG1O75629 220 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 MAP3K6O95382 1288 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 LCA5LO95447 670 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 ZNF28P17035 718 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 ZNF30P17039 623 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 CES1P23141 567 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 GARSP41250 739 aaKnown RBP12.05□□□□□ -0.48
DDX54-206ENST00000549271 GPR1P46091 355 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 POLD2P49005 469 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 MAXP61244 160 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 GBE1Q04446 702 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 LRP8Q14114 963 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 IHHQ14623 411 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 PYCR3Q53H96 274 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 SNAP47Q5SQN1 464 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 JMJD6Q6NYC1 403 aaPredicted RBP12.05□□□□□ -0.48
DDX54-206ENST00000549271 TSPAN33Q86UF1 283 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms