RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TNRC6AQ8NDV7 1962 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TRBV5-3A0A0A0MS03 114 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ARRDC5A6NEK1 342 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 NPIPB15A6NHN6 443 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CAPN14A8MX76 684 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM38O00635 465 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SNX2O60749 519 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 EPN2O95208 641 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PRNPP04156 253 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 C8AP07357 584 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 C8GP07360 202 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 C1SP09871 688 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ZCCHC18P0CG32 403 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GAAP10253 952 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 BPIP17213 487 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 EN2P19622 333 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GLDCP23378 1020 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GP5P40197 560 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ZFP36L2P47974 494 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 MAP3K7CLP57077 242 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PPP2R2AP63151 447 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ELAVL3Q14576 367 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CRYMQ14894 314 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 KIAA0040Q15053 153 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 MYLK3Q32MK0 819 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 UGT3A2Q3SY77 523 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ATP13A4Q4VNC1 1196 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GPR158Q5T848 1215 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 NEPROQ6NW34 567 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SLC36A4Q6YBV0 504 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TPGS1Q6ZTW0 290 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CCDC80Q76M96 950 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TAOK1Q7L7X3 1001 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SPRED1Q7Z699 444 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CLNKQ7Z7G1 428 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ZBTB44Q8NCP5 570 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ABHD11Q8NFV4 315 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 OR2A12Q8NGT7 310 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 BPIFB1Q8TDL5 484 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ADAMTS18Q8TE60 1221 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PTPRN2Q92932 1015 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 LPPQ93052 612 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM44Q96DX7 344 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 NXF1Q9UBU9 619 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PNMA8BQ9ULN7 279 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SLC12A4Q9UP95 1085 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SCAF8Q9UPN6 1271 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PLLPQ9Y342 182 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CDY1Q9Y6F8 540 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 A0A1B0GTQ1 180 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 A0A1W2PQF6 199 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 G3V2L1 256 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 K7ESF4 209 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 NRG2O14511 850 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 LIN7AO14910 233 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SMAD6O43541 496 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GLRA3O75311 464 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 GP1BAP07359 652 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TSPAN19P0C672 248 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 XRCC1P18887 633 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 IL10P22301 178 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ACAT1P24752 427 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 MAP3K8P41279 467 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SERPINB8P50452 374 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PKNOX1P55347 436 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 POLR2LP62875 67 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 DSC2Q02487 901 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ZSWIM7Q19AV6 140 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ANKRD20A4Q4UJ75 823 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 PPM1LQ5SGD2 360 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 AGBL4Q5VU57 503 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 RETSATQ6NUM9 610 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 IKBIPQ70UQ0 350 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SLC9B2Q86UD5 537 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 SLC22A9Q8IVM8 553 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CCDC105Q8IYK2 499 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 STK35Q8TDR2 534 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CLEC4CQ8WTT0 213 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CCDC127Q96BQ5 260 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF512Q96ME7 567 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CCNL2Q96S94 520 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-212ENST00000549162 CD180Q99467 661 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 DEF6Q9H4E7 631 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL14Q9P2G3 628 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 ABCD2Q9UBJ2 740 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 FADS3Q9Y5Q0 445 aa4.85□□□□□ -1.63
SCAF11-212ENST00000549162 TCRBV7S2A1N4TA0A589 114 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 M0QYT0 321 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 FAAHO00519 579 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 RRP9O43818 475 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 MAGEC1O60732 1142 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 KERAO60938 352 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ATG13O75143 517 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 NDUFS2O75306 463 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 ERN1O75460 977 aaKnown RBP4.84□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL2O95198 593 aa4.84□□□□□ -1.63
SCAF11-212ENST00000549162 CRTAMO95727 393 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms