RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PRR35P0CG20 571 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 MTHFD2P13995 350 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 ZNF24P17028 368 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 NR4A1P22736 598 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 CES1P23141 567 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 ZFP36L2P47974 494 aaKnown RBP22.95■■□□□ 1.27
NPAS3-206ENST00000548645 UFM1P61960 85 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 CHRNB3Q05901 458 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 ILF2Q12905 390 aaKnown RBP22.95■■□□□ 1.27
NPAS3-206ENST00000548645 OR4D1Q15615 310 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 IQSEC1Q6DN90 963 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 HID1Q8IV36 788 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 SH3RF2Q8TEC5 729 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 SLC25A51Q9H1U9 297 aa22.95■■□□□ 1.27
NPAS3-206ENST00000548645 HTR1AP08908 422 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 TIGD2Q4W5G0 525 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 CCDC80Q76M96 950 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 SLCO6A1Q86UG4 719 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 ITFG1Q8TB96 612 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 BPTFQ12830 3046 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 HOXB8P17481 243 aaPredicted RBP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 ITIH1P19827 911 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 CDC42EP1Q00587 391 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 PCBP1Q15365 356 aaKnown RBP eCLIP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 HPS1Q92902 700 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 EFHD2Q96C19 240 aaPredicted RBP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 PABPC5Q96DU9 382 aaKnown RBP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 PCED1BQ96HM7 432 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 BRINP2Q9C0B6 783 aa22.95■■□□□ 1.26
NPAS3-206ENST00000548645 MARCH4Q9P2E8 410 aaPredicted RBP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 MAGED1Q9Y5V3 778 aaPredicted RBP22.95■■□□□ 1.26
NPAS3-206ENST00000548645 MTHFRP42898 656 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 CTF1Q16619 201 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 MEP1AQ16819 746 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 PIK3C3Q8NEB9 887 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 STARD8Q92502 1023 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 ATP13A1Q9HD20 1204 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 TMEM30AQ9NV96 361 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 G3V2T6 193 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 EFL1Q7Z2Z2 1120 aaKnown RBP22.94■■□□□ 1.26
NPAS3-206ENST00000548645 ATOH8Q96SQ7 321 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 FEM1AQ9BSK4 669 aa22.94■■□□□ 1.26
NPAS3-206ENST00000548645 TFB2MQ9H5Q4 396 aaKnown RBP22.94■■□□□ 1.26
NPAS3-206ENST00000548645 PIN4Q9Y237 131 aaKnown RBP22.94■■□□□ 1.26
NPAS3-206ENST00000548645 XYLBO75191 536 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 GPR32O75388 356 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 PABPC1P11940 636 aaKnown RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 HTR7P34969 479 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 ARSDP51689 593 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 DEPDC1Q5TB30 811 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 BCL7BQ9BQE9 202 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 TIMM22Q9Y584 194 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 PPP2R3BQ9Y5P8 575 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 DICER1Q9UPY3 1922 aaKnown RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 FAM234BA2RU67 622 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 MYBPHLA2RUH7 354 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 CCL22O00626 93 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 SNX2O60749 519 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 OXSR1O95747 527 aaPredicted RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 ANXA6P08133 673 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 PCNAP12004 261 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 ECT2LQ008S8 904 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 TAPT1Q6NXT6 567 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 RALGPS2Q86X27 583 aaPredicted RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 NUSAP1Q9BXS6 441 aaKnown RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 SEMA4BQ9NPR2 832 aaPredicted RBP22.93■■□□□ 1.26
NPAS3-206ENST00000548645 COMMD8Q9NX08 183 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 ZIM2Q9NZV7 527 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 RBPJLQ9UBG7 517 aa22.93■■□□□ 1.26
NPAS3-206ENST00000548645 HHLA1C9JL84 531 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 NDUFS2O75306 463 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 CHEK2O96017 543 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 EIF2S1P05198 315 aaKnown RBP22.92■■□□□ 1.26
NPAS3-206ENST00000548645 DARSP14868 501 aaKnown RBP22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ZNF37AP17032 561 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-206ENST00000548645 TGM1P22735 817 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 HOXC13P31276 330 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 DPY19L1Q2PZI1 675 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ANKS6Q68DC2 871 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 PRR23BQ6ZRT6 265 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 DTWD1Q8N5C7 304 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ISG20Q96AZ6 181 aaKnown RBP22.92■■□□□ 1.26
NPAS3-206ENST00000548645 NODALQ96S42 347 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 KLHL25Q9H0H3 589 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 PTCH2Q9Y6C5 1203 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 MROH6A6NGR9 719 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 GMNNO75496 209 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ZNF362Q5T0B9 420 aaPredicted RBP22.92■■□□□ 1.26
NPAS3-206ENST00000548645 LRRC49Q8IUZ0 686 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 OR7A2PQ8NGA2 310 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ZFP90Q8TF47 636 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 TMEM209Q96SK2 561 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 ATP13A3Q9H7F0 1226 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 POPDC3Q9HBV1 291 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 NDFIP2Q9NV92 336 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 GRXCR2A6NFK2 248 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 OR51F1A6NGY5 319 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 PFDN6O15212 129 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 SLC2A3P11169 496 aa22.92■■□□□ 1.26
NPAS3-206ENST00000548645 PIGFQ07326 219 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms