RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 KRT38O76015 456 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 CLDN7O95471 211 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 SYPP08247 313 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 SNRPAP09012 282 aaKnown RBP17.27■□□□□ 0.36
HDAC7-227ENST00000548080 C1SP09871 688 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 NR1D1P20393 614 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 LPOP22079 712 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-227ENST00000548080 NUDT1P36639 197 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 ETV3P41162 512 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 CTSKP43235 329 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 PDE1BQ01064 536 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 ARHGEF7Q14155 803 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 HLA-BQ31612 363 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 STPG1Q5TH74 334 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 TRABD2AQ86V40 505 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 CNPY4Q8N129 248 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 TTC30BQ8N4P2 665 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 MFSD2AQ8NA29 543 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 HDAC10Q969S8 669 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 CENPTQ96BT3 561 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 KLHDC7BQ96G42 594 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 COQ10AQ96MF6 247 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 AGAP2Q99490 1192 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 FAM167BQ9BTA0 163 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 TMEM9BQ9NQ34 198 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 NLE1Q9NVX2 485 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-227ENST00000548080 FNDC3AQ9Y2H6 1198 aaKnown RBP17.27■□□□□ 0.36
HDAC7-227ENST00000548080 ACTL7BQ9Y614 415 aa17.27■□□□□ 0.36
HDAC7-227ENST00000548080 ASCC3Q8N3C0 2202 aaKnown RBP17.27■□□□□ 0.35
HDAC7-227ENST00000548080 FOXO6A8MYZ6 492 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 GOLGA8TH3BQL2 631 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 FPGTO14772 594 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 AURKAO14965 403 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 BUD23O43709 281 aaKnown RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 PSMA3P25788 255 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 CNTFP26441 200 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 GP5P40197 560 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 ZNF140P52738 457 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 NXPH1P58417 271 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 PRAMEP78395 509 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 TMPRSS15P98073 1019 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 LRRC14Q15048 493 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 RSPO4Q2I0M5 234 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 GRTP1Q5TC63 336 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 NEPROQ6NW34 567 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 Q6ZSR6 202 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 Q6ZVL8 140 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 LYSMD3Q7Z3D4 306 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 ABI3BPQ7Z7G0 1075 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 CNTN4Q8IWV2 1026 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 SRRM1Q8IYB3 904 aaKnown RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 SLC22A18ASQ8N1D0 253 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 ARFGAP2Q8N6H7 521 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 OR13C4Q8NGS5 318 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 GABPB2Q8TAK5 448 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 CALML6Q8TD86 181 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 DNAJC1Q96KC8 554 aaKnown RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 LENG8Q96PV6 779 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 SENP1Q9P0U3 644 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 ZNF711Q9Y462 761 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 PSAT1Q9Y617 370 aa17.26■□□□□ 0.35
HDAC7-227ENST00000548080 TDRD6O60522 2096 aaKnown RBP17.26■□□□□ 0.35
HDAC7-227ENST00000548080 C1orf232A0A0U1RR37 186 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 A6NNZ2 444 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 TRIM49D1C9J1S8 452 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 K7ESM1 405 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 MT-ND3P03897 115 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 ARSDP51689 593 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 PPP2R2AP63151 447 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 PTSQ03393 145 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 PTPRCAPQ14761 206 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 ZNF542PQ5EBM4 170 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 STRA8Q7Z7C7 330 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 OR4K2Q8NGD2 314 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 OR6P1Q8NGX9 317 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 MTBPQ96DY7 904 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 NUS1Q96E22 293 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 TBATAQ96M53 351 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 GPR63Q9BZJ6 419 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 OR1A2Q9Y585 309 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 HS3ST3A1Q9Y663 406 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 SPTBN4Q9H254 2564 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 CABIN1Q9Y6J0 2220 aa17.25■□□□□ 0.35
HDAC7-227ENST00000548080 A0A1W2PPM1 405 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 STX7O15400 261 aaKnown RBP17.24■□□□□ 0.35
HDAC7-227ENST00000548080 NFKBIAP25963 317 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 SPRP35270 261 aaPredicted RBP17.24■□□□□ 0.35
HDAC7-227ENST00000548080 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
HDAC7-227ENST00000548080 INPP5AQ14642 412 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 KYAT3Q6YP21 454 aaKnown RBP17.24■□□□□ 0.35
HDAC7-227ENST00000548080 DENND6BQ8NEG7 585 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 ASB12Q8WXK4 309 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 CDKN2AIPNLQ96HQ2 116 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 LYSMD1Q96S90 227 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 C1QTNF7Q9BXJ2 289 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 CCDC162PA2VCL2 907 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 CCL22O00626 93 aa17.24■□□□□ 0.35
HDAC7-227ENST00000548080 STC1P52823 247 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms