RNA–Protein interactions for RNA: ENST00000547842.1

DDX23-205, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-205	ENST00000547842	SLC25A23	Q9BV35	468 aa		13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	GPR87	Q9BY21	358 aa		13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	ACTL8	Q9H568	366 aa		13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	FANCL	Q9NW38	375 aa		13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	EPHA6	Q9UF33	1036 aa		13.65	□□□□□ -0.22
DDX23-205	ENST00000547842	RPL26L1	Q9UNX3	145 aa	Known RBP	13.65	□□□□□ -0.22
DDX23-205	ENST00000547842		A1L4Q6	167 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	LGALS16	A8MUM7	142 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	KIF1C	O43896	1103 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	SORBS2	O94875	1100 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	FTL	P02792	175 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF8	P17098	575 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	NELFE	P18615	380 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	UGT8	Q16880	541 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	SMTNL2	Q2TAL5	461 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	ANKRD20A8P	Q5CZ79	823 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	PAPD7	Q5XG87	772 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	ALG1L	Q6GMV1	187 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	CYB5D1	Q6P9G0	228 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	TRIM48	Q8IWZ4	208 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	HSPH1	Q92598	858 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	ZDHHC12	Q96GR4	267 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	BRD8	Q9H0E9	1235 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	OSGEPL1	Q9H4B0	414 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	TRIM39	Q9HCM9	518 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	PDE7B	Q9NP56	450 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	PKD2L2	Q9NZM6	624 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	SLC23A2	Q9UGH3	650 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	LIMA1	Q9UHB6	759 aa	Known RBP	13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	ADGRG1	Q9Y653	693 aa		13.64	□□□□□ -0.23
DDX23-205	ENST00000547842	PRRC2C	Q9Y520	2896 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	C1orf232	A0A0U1RR37	186 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	LRRC10B	A6NIK2	292 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	GPR89A	B7ZAQ6	455 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	GPR89B	P0CG08	455 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	RARA	P10276	462 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	GZMA	P12544	262 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	CA4	P22748	312 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	PTPN4	P29074	926 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	CCL11	P51671	97 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	DSC2	Q02487	901 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	INPP5J	Q15735	1006 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	ABRAXAS1	Q6UWZ7	409 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	BPHL	Q86WA6	291 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	ANKRD20A12P	Q8NF67	263 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	CCHCR1	Q8TD31	782 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	MAML1	Q92585	1016 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	TDRD1	Q9BXT4	1180 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	RAB33B	Q9H082	229 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	NUP62CL	Q9H1M0	184 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	OR2AG1	Q9H205	316 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	PCDH9	Q9HC56	1237 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	SLC40A1	Q9NP59	571 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	CASS4	Q9NQ75	786 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	AMACR	Q9UHK6	382 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	SHANK1	Q9Y566	2161 aa		13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.63	□□□□□ -0.23
DDX23-205	ENST00000547842	WIPF3	A6NGB9	483 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	TCP11X1	B4DZS4	312 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ANKRD66	B4E2M5	251 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	CHUK	O15111	745 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	MATN3	O15232	486 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	SLC25A14	O95258	325 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	TIAF1	O95411	115 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	TCF4	P15884	667 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	VARS	P26640	1264 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	COL8A1	P27658	744 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	CAPZB	P47756	277 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF165	P49910	485 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	RPS15	P62841	145 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF648	Q5T619	568 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ZNF787	Q6DD87	383 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	PWWP2B	Q6NUJ5	590 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	FAM92B	Q6ZTR7	304 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	SYVN1	Q86TM6	617 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	RBM12B	Q8IXT5	1001 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	LPCAT1	Q8NF37	534 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ARRDC2	Q8TBH0	407 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	RSC1A1	Q92681	617 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	MLPH	Q9BV36	600 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ING2	Q9H160	280 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	PCDH18	Q9HCL0	1135 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	MRPL47	Q9HD33	250 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ARFGAP3	Q9NP61	516 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	ACSS2	Q9NR19	701 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	POT1	Q9NUX5	634 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	HAUS2	Q9NVX0	235 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	SEMA5B	Q9P283	1151 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	RARRES3	Q9UL19	164 aa		13.62	□□□□□ -0.23
DDX23-205	ENST00000547842	MYO6	Q9UM54	1294 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms