RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 GALNT10Q86SR1 603 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 SLC30A3Q99726 388 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 RPF2Q9H7B2 306 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 CCSER2Q9H7U1 834 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 NANOGQ9H9S0 305 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 MTHFRP42898 656 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 RAD23AP54725 363 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 MS4A13Q5J8X5 152 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 CYHR1Q6ZMK1 362 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TRPV3Q8NET8 790 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 ELMO1Q92556 727 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 ST14Q9Y5Y6 855 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 ARVCFO00192 962 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 G6PDP11413 515 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 POLR2IP36954 125 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 HSPA7P48741 367 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 HK2P52789 917 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 LCP2Q13094 533 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 DDX39BQ13838 428 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 SPIDRQ14159 915 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 SELPLGQ14242 412 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 UPP1Q16831 310 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 SYVN1Q86TM6 617 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 SEPT8Q92599 483 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 PRDM8Q9NQV8 689 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 IKZF3Q9UKT9 509 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 AP1G1O43747 822 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 MGEA5O60502 916 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 CST1P01037 141 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 DNAJB13P59910 316 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TXNL4AP83876 142 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 FPGSQ05932 587 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TRAP1Q12931 704 aaKnown RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TMTC4Q5T4D3 741 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 EGFLAMQ63HQ2 1017 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 RSPH1Q8WYR4 309 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 MYEOVQ96EZ4 313 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 NRBF2Q96F24 287 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 MYOCQ99972 504 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
BRF1-210ENST00000547374 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 CD300AQ9UGN4 299 aa12.88□□□□□ -0.35
BRF1-210ENST00000547374 VPS26AO75436 327 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 MC4RP32245 332 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ADRA1AP35348 466 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 CTBSQ01459 385 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 TRIM16LQ309B1 348 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 KDELC1Q6UW63 502 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 KIAA0408Q6ZU52 694 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ZNF554Q86TJ5 538 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ITIH5Q86UX2 942 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 SLC22A15Q8IZD6 547 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 GLMNQ92990 594 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ACBD6Q9BR61 282 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 UTS2RQ9UKP6 389 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ZFC3H1O60293 1989 aaKnown RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 SLC22A2O15244 555 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 SLC7A4O43246 635 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 IDO1P14902 403 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 DNAJB2P25686 324 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 VARSP26640 1264 aaKnown RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 CASP9P55211 416 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
BRF1-210ENST00000547374 PGS1Q32NB8 556 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 PYCR3Q53H96 274 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ARMC12Q5T9G4 340 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 GPRIN3Q6ZVF9 776 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 PNPT1Q8TCS8 783 aaKnown RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 IMP4Q96G21 291 aaKnown RBP12.87□□□□□ -0.35
BRF1-210ENST00000547374 KATNBL1Q9H079 304 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 INVSQ9Y283 1065 aa12.87□□□□□ -0.35
BRF1-210ENST00000547374 SPO11Q9Y5K1 396 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms