RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MAGEA2P43356 314 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 CBLBQ13191 982 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 OXSMQ9NWU1 459 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ZMYM5Q9UJ78 669 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 H7C2Y5 167 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 DPYSL4O14531 572 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 HTRA2O43464 458 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-212ENST00000546744 AP2A2O94973 939 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
PTCH1-212ENST00000546744 NTSP30990 170 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 FMO4P31512 558 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 GRIA2P42262 883 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 RELAQ04206 551 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 OR8H3Q8N146 312 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 PKP2Q99959 881 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 GULP1Q9UBP9 304 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 OAZ3Q9UMX2 235 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 RPL36Q9Y3U8 105 aaKnown RBP12.71□□□□□ -0.37
PTCH1-212ENST00000546744 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 HLCSP50747 726 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 GABARAPL2P60520 117 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 CYP4F2P78329 520 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 CYP4F3Q08477 520 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 ELAVL2Q12926 359 aaKnown RBP12.71□□□□□ -0.37
PTCH1-212ENST00000546744 ABRQ12979 859 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 SNAP47Q5SQN1 464 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 LCLAT1Q6UWP7 414 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-212ENST00000546744 HID1Q8IV36 788 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 STON2Q8WXE9 905 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 C12orf66Q96MD2 445 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 TKTL2Q9H0I9 626 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 SIX2Q9NPC8 291 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 CD93Q9NPY3 652 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 OGDHLQ9ULD0 1010 aa12.71□□□□□ -0.37
PTCH1-212ENST00000546744 FAM159BA6NKW6 160 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 TNFRSF11BO00300 401 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 ERN1O75460 977 aaKnown RBP12.71□□□□□ -0.38
PTCH1-212ENST00000546744 THP07101 528 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 LINC00032P0C843 101 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 KLRC2P26717 231 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-212ENST00000546744 PNLIPRP1P54315 467 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 SMCO1Q147U7 214 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 ACOX1Q15067 660 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 TGFBIQ15582 683 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 SLC25A52Q3SY17 297 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 CANT1Q8WVQ1 401 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 EBF4Q9BQW3 602 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 FAIM2Q9BWQ8 316 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 IDI2Q9BXS1 227 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 ACP6Q9NPH0 428 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 NUDT4Q9NZJ9 180 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.38
PTCH1-212ENST00000546744 J3QRK9 145 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 KPNA6O60684 536 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 MRPS14O60783 128 aaKnown RBP12.7□□□□□ -0.38
PTCH1-212ENST00000546744 C9P02748 559 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF806P0C7X5 589 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 CKMT2P17540 419 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 TYMPP19971 482 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 OMPP47874 163 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 NPTX1Q15818 432 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 EPGNQ6UW88 154 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 XKR5Q6UX68 686 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF655Q8N720 491 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-212ENST00000546744 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FBXL8Q96CD0 374 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PPM1MQ96MI6 270 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 FNDC11Q9BVV2 318 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ZBTB26Q9HCK0 441 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
PTCH1-212ENST00000546744 SLC25A13Q9UJS0 675 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 BTRCQ9Y297 605 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 DERAQ9Y315 318 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 DFNA5O60443 496 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PRKCHP24723 683 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 CD40LGP29965 261 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 HUNKP57058 714 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PTPRNQ16849 979 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
PTCH1-212ENST00000546744 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms