RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CKMT2P17540 419 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 CTBSQ01459 385 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 PROX2Q3B8N5 592 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 GPR33Q49SQ1 333 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SLC30A9Q6PML9 568 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 CRTC3Q6UUV7 619 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 ZNF534Q76KX8 674 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 CAND1Q86VP6 1230 aaKnown RBP16.63■□□□□ 0.25
LTBR-215ENST00000546296 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 DDHD1Q8NEL9 900 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 OR6P1Q8NGX9 317 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 KIF18AQ8NI77 898 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 GPBAR1Q8TDU6 330 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 HDAC10Q969S8 669 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 APOLD1Q96LR9 279 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 TRIM51Q9BSJ1 452 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 TRIM31Q9BZY9 425 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 DPEP2Q9H4A9 486 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SMOXQ9NWM0 555 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SYBUQ9NX95 663 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 NCKIPSDQ9NZQ3 722 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SAMD15Q9P1V8 674 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SIRPGQ9P1W8 387 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 SLC2A6Q9UGQ3 507 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 PLEKHM1Q9Y4G2 1056 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 CABIN1Q9Y6J0 2220 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 TP53BP1Q12888 1972 aaPredicted RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 SDR42E2A6NKP2 422 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 KMOO15229 486 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 RALBP11234 206 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 MYF5P13349 255 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 ACP5P13686 325 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 AK4P27144 223 aaPredicted RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 CA5AP35218 305 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 RPIAP49247 311 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 DUSP3P51452 185 aaPredicted RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 ARSDP51689 593 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 PRAMEP78395 509 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 CACNG1Q06432 222 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 TUBB2AQ13885 445 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 LRP8Q14114 963 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 NR0B2Q15466 257 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 KHDC1Q4VXA5 237 aaKnown RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 C6orf132Q5T0Z8 1188 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 RNASEH2BQ5TBB1 312 aaKnown RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 GLRX5Q86SX6 157 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 LRRTM4Q86VH4 590 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 TRAPPC5Q8IUR0 188 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 NXPE1Q8N323 547 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 FAM181AQ8N9Y4 354 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 OR13J1Q8NGT2 312 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.62■□□□□ 0.25
LTBR-215ENST00000546296 ZNF778Q96MU6 729 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 SERPINB12Q96P63 405 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 COPS8Q99627 209 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 TUBB2BQ9BVA1 445 aa16.62■□□□□ 0.25
LTBR-215ENST00000546296 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
LTBR-215ENST00000546296 MAGEB16A2A368 324 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 FAM187AA6NFU0 413 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 EFCAB8A8MWE9 144 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 B4DGG1 531 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 CFAP99D6REC4 459 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 PSMA3P25788 255 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 ACTR1BP42025 376 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 ACTR1AP61163 376 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 TMEM220Q6QAJ8 160 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 AFTPHQ6ULP2 937 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 DET1Q7L5Y6 550 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 SERPINA9Q86WD7 417 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 NRROSQ86YC3 692 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 RASGEF1AQ8N9B8 481 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 HEXDCQ8WVB3 486 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 PEX13Q92968 403 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 TTC1Q99614 292 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 KIFC1Q9BW19 673 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 BOCQ9BWV1 1114 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
LTBR-215ENST00000546296 TAAR2Q9P1P5 351 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 ANAPC5Q9UJX4 755 aa16.61■□□□□ 0.25
LTBR-215ENST00000546296 PCYT1BQ9Y5K3 369 aaPredicted RBP16.61■□□□□ 0.25
LTBR-215ENST00000546296 CPED1A4D0V7 1026 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 OR51F1A6NGY5 319 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 CHUKO15111 745 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 GOT2P00505 430 aaKnown RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 FTH1P19P0C7X4 201 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 CKMT1AP12532 417 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 IVDP26440 423 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 NMBRP28336 390 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 CDKN1CP49918 316 aaPredicted RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 INSCQ1MX18 579 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
LTBR-215ENST00000546296 FASTKD1Q53R41 847 aaKnown RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 N4BP2L1Q5TBK1 243 aaPredicted RBP16.6■□□□□ 0.25
LTBR-215ENST00000546296 CES3Q6UWW8 571 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms