RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 HLA-DQB2P05538 268 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 MMP2P08253 660 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 KRT7P08729 469 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 GPR89BP0CG08 455 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 CA4P22748 312 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 SLC19A1P41440 591 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 LEPRP48357 1165 aaKnown RBP16.43■□□□□ 0.22
CPSF7-225ENST00000545934 STX1AQ16623 288 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 IFI16Q16666 785 aaKnown RBP16.43■□□□□ 0.22
CPSF7-225ENST00000545934 C4orf17Q53FE4 359 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 ANKRD20A8PQ5CZ79 823 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 ASB18Q6ZVZ8 466 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 PRSS42Q7Z5A4 293 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 TMEM135Q86UB9 458 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 TEX19Q8NA77 164 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 KLHL6Q8WZ60 621 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 OR6C1Q96RD1 312 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 TRIM39Q9HCM9 518 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 KLC4Q9NSK0 619 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 DTLQ9NZJ0 730 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 NFKBIL1Q9UBC1 381 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-225ENST00000545934 SLC23A2Q9UGH3 650 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 KCND3Q9UK17 655 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 SPTAN1Q13813 2472 aaKnown RBP16.43■□□□□ 0.22
CPSF7-225ENST00000545934 CREG1O75629 220 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 RFPL1O75677 317 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 KIAA0754O94854 1291 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 NDUFA10O95299 355 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 BRAFP15056 766 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 TYRP1P17643 537 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 KRT81Q14533 505 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.42■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF648Q5T619 568 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-225ENST00000545934 SASS6Q6UVJ0 657 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 ABRAXAS1Q6UWZ7 409 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 ADGRG6Q86SQ4 1221 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.42■□□□□ 0.22
CPSF7-225ENST00000545934 RNF31Q96EP0 1072 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 STAMBPL1Q96FJ0 436 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 TGM7Q96PF1 710 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 MLPHQ9BV36 600 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-225ENST00000545934 RAB33BQ9H082 229 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 SEMA5BQ9P283 1151 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
CPSF7-225ENST00000545934 SPTBN1Q01082 2364 aaKnown RBP16.41■□□□□ 0.22
CPSF7-225ENST00000545934 KIF1CO43896 1103 aaKnown RBP16.41■□□□□ 0.22
CPSF7-225ENST00000545934 SPAG6O75602 509 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 VIPP01282 170 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 SKILP12757 684 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 NOP2P46087 812 aaKnown RBP16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CAPZBP47756 277 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 UQCRFS1P47985 274 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 SEPHS1P49903 392 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 DCDC1P59894 354 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 DNASE1L3Q13609 305 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CCDC183Q5T5S1 534 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CAPRIN2Q6IMN6 1127 aaKnown RBP16.41■□□□□ 0.22
CPSF7-225ENST00000545934 GPR26Q8NDV2 337 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CCHCR1Q8TD31 782 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 RSC1A1Q92681 617 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 TIMM29Q9BSF4 260 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 BRD8Q9H0E9 1235 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 THAP2Q9H0W7 228 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 OR2AG1Q9H205 316 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 LRRC4CQ9HCJ2 640 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 ARFGAP3Q9NP61 516 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 POT1Q9NUX5 634 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 EPHA6Q9UF33 1036 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 IP6K2Q9UHH9 426 aa16.41■□□□□ 0.22
CPSF7-225ENST00000545934 CDC14CA4D256 554 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 KATNA1O75449 491 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 TIAF1O95411 115 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 MT-ND3P03897 115 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 SEMA5AQ13591 1074 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 LAMB3Q13751 1172 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF569Q5MCW4 686 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 AGAP9Q5VTM2 703 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 HGSNATQ68CP4 663 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 PDPK2PQ6A1A2 396 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 WASH2PQ6VEQ5 465 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 RASGRP3Q8IV61 690 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF547Q8IVP9 402 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 TRAM1L1Q8N609 369 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 GALNT11Q8NCW6 608 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 CT55Q8WUE5 264 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 GLYATL1Q969I3 302 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 FAF2Q96CS3 445 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 HDAC11Q96DB2 347 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 TRIB3Q96RU7 358 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF670Q9BS34 389 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 ZSCAN5AQ9BUG6 496 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 NUP85Q9BW27 656 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 TRIM55Q9BYV6 548 aa16.4■□□□□ 0.22
CPSF7-225ENST00000545934 TWSG1Q9GZX9 223 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms