RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DENND6AQ8IWF6 608 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
LIMS2-217ENST00000545738 UBXN4Q92575 508 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 TXLNGYQ9BZA5 131 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 OR2AG1Q9H205 316 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 PHPT1Q9NRX4 125 aaPredicted RBP16.12■□□□□ 0.17
LIMS2-217ENST00000545738 TM7SF3Q9NS93 570 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 SLC17A4Q9Y2C5 497 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 SLC30A1Q9Y6M5 507 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 IGLV3-16A0A075B6K0 115 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PRR5-ARHGAP8B1AHC4 643 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 DNAJC6O75061 913 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 ZNF8P17098 575 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 THOP1P52888 689 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CTSCP53634 463 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 OVGP1Q12889 678 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 HSP90AA5PQ58FG0 334 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 MARK2Q7KZI7 788 aaKnown RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PHYKPLQ8IUZ5 450 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PYROXD1Q8WU10 500 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 WDR92Q96MX6 357 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 FAM129AQ9BZQ8 928 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CDC42EP4Q9H3Q1 356 aaKnown RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SEMA4GQ9NTN9 838 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CATSPERZQ9NTU4 200 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 C20orf96Q9NUD7 363 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 MOCS1Q9NZB8 636 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 NINJ2Q9NZG7 142 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CRLS1Q9UJA2 301 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 GMEB2Q9UKD1 530 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SLC6A14Q9UN76 642 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PRSS21Q9Y6M0 314 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 ARID1BQ8NFD5 2236 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PRSS38A1L453 326 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CACNB4O00305 520 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CD3EAPO15446 510 aaKnown RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CELA2BP08218 269 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 ENGP17813 658 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SLC1A2P43004 574 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CTBP1Q13363 440 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 KYNUQ16719 465 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 LONRF1Q17RB8 773 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SPANXN3Q5MJ09 141 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CCNI2Q6ZMN8 369 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 TAS2R42Q7RTR8 314 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 KCNMB4Q86W47 210 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PARGQ86W56 976 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 RELL1Q8IUW5 271 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CLDN19Q8N6F1 224 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 RASGEF1AQ8N9B8 481 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CEP76Q8TAP6 659 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 CERS2Q96G23 380 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SCARF2Q96GP6 870 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 NAT9Q9BTE0 207 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 FOXP3Q9BZS1 431 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 EPB41L4BQ9H329 900 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 MTRF1LQ9UGC7 380 aaKnown RBP16.11■□□□□ 0.17
LIMS2-217ENST00000545738 SUFUQ9UMX1 484 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 PLEKHM1Q9Y4G2 1056 aa16.11■□□□□ 0.17
LIMS2-217ENST00000545738 ZFC3H1O60293 1989 aaKnown RBP16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TCRBV9S1A1TA0A576 114 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 CXorf49A8MYA2 514 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-217ENST00000545738 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TOR1BO14657 336 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TTC4O95801 387 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 PYGLP06737 847 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 GABRB3P28472 473 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 C21orf59P57076 290 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 MPP1Q00013 466 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 IL9RQ01113 521 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TMEM115Q12893 351 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TEAD4Q15561 434 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 HLA-BQ31612 363 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 GPR33Q49SQ1 333 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 ZNF470Q6ECI4 717 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 NEPROQ6NW34 567 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 XKR5Q6UX68 686 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 CILP2Q8IUL8 1156 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 BEND7Q8N7W2 519 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-217ENST00000545738 CCL4L1Q8NHW4 92 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 GSDMBQ8TAX9 411 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 GDAP1Q8TB36 358 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 FAM174AQ8TBP5 190 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 PARD6BQ9BYG5 372 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 CYP4F12Q9HCS2 524 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 NCDNQ9UBB6 729 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 GULP1Q9UBP9 304 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 PSAT1Q9Y617 370 aa16.1■□□□□ 0.17
LIMS2-217ENST00000545738 ASCC3Q8N3C0 2202 aaKnown RBP16.09■□□□□ 0.17
LIMS2-217ENST00000545738 OR2AG2A6NM03 316 aa16.09■□□□□ 0.17
LIMS2-217ENST00000545738 CHUKO15111 745 aa16.09■□□□□ 0.17
LIMS2-217ENST00000545738 SDC3O75056 442 aa16.09■□□□□ 0.17
LIMS2-217ENST00000545738 SRP54P61011 504 aaKnown RBP16.09■□□□□ 0.17
LIMS2-217ENST00000545738 EFTUD2Q15029 972 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS2-217ENST00000545738 TYSND1Q2T9J0 566 aa16.09■□□□□ 0.17
LIMS2-217ENST00000545738 FASTKD1Q53R41 847 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms