RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 CTBSQ01459 385 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 TMEM115Q12893 351 aaPredicted RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 DHX34Q14147 1143 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 PCID2Q5JVF3 399 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SLC30A9Q6PML9 568 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CRTC3Q6UUV7 619 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SYDE1Q6ZW31 735 aaPredicted RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ZNF572Q7Z3I7 529 aaPredicted RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SNX20Q7Z614 316 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 GKN2Q86XP6 184 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SFTPA2Q8IWL1 248 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 MPP5Q8N3R9 675 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 MCUQ8NE86 351 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 GPBAR1Q8TDU6 330 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 TOR4AQ9NXH8 423 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CRLS1Q9UJA2 301 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SLC30A1Q9Y6M5 507 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 U3KQA8 63 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CACNA1AO00555 2505 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CCDC162PA2VCL2 907 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 KIF2AO00139 706 aaPredicted RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 AP3B1O00203 1094 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CHUKO15111 745 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 GRID2O43424 1007 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 TNFSF14O43557 240 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ITGALP20701 1170 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 NPY2RP49146 381 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ACVR1Q04771 509 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ILF3Q12906 894 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ZRANB3Q5FWF4 1079 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 LDLRAP1Q5SW96 308 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 C6orf132Q5T0Z8 1188 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 IZUMO3Q5VZ72 239 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ZCCHC8Q6NZY4 707 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 CHST15Q7LFX5 561 aaPredicted RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 GLRX5Q86SX6 157 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 ZNF547Q8IVP9 402 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 PIANPQ8IYJ0 282 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 PNPLA1Q8N8W4 532 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 HDAC10Q969S8 669 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 TRIM56Q9BRZ2 755 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 BOCQ9BWV1 1114 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 TRIM31Q9BZY9 425 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 SIRPGQ9P1W8 387 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 RIMKLBQ9ULI2 386 aa19.1■□□□□ 0.65
SDR39U1-203ENST00000544691 RAD51CO43502 376 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 VEGFDO43915 354 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 MLNP12872 115 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 ACP5P13686 325 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 NMBRP28336 390 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 MAGEA3P43357 314 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 LAMB3Q13751 1172 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 CES3Q6UWW8 571 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 NLRP9Q7RTR0 991 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 SLC35F3Q8IY50 421 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 AGGF1Q8N302 714 aaeCLIP19.09■□□□□ 0.652e-17■□□□□ 8.1
SDR39U1-203ENST00000544691 NXPE1Q8N323 547 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 SDR16C5Q8N3Y7 309 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 RASGEF1AQ8N9B8 481 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 FAM181AQ8N9Y4 354 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 FAM46DQ8NEK8 389 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 MFSD3Q96ES6 412 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 GSDMCQ9BYG8 508 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 RMI1Q9H9A7 625 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 XAB2Q9HCS7 855 aaKnown RBP19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 TREX1Q9NSU2 369 aa19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 SPATS2LQ9NUQ6 558 aaKnown RBP19.09■□□□□ 0.65
SDR39U1-203ENST00000544691 TRBV5-4A0A0C4DH59 114 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 GPR89AB7ZAQ6 455 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 TUBB4AP04350 444 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 GPR89BP0CG08 455 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 AKT1P31749 480 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 FOXN2P32314 431 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 ACTR1BP42025 376 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 CTSCP53634 463 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 ACTR1AP61163 376 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 B4GALNT1Q00973 533 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 PLA2G4EQ3MJ16 856 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 LVRNQ6Q4G3 990 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 SLCO6A1Q86UG4 719 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 TRAPPC5Q8IUR0 188 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 SCG3Q8WXD2 468 aaKnown RBP19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 TTC25Q96NG3 672 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 KIFC1Q9BW19 673 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 DPEP2Q9H4A9 486 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 TAAR2Q9P1P5 351 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 GPR34Q9UPC5 381 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 KCNK6Q9Y257 313 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 MRFAP1Q9Y605 127 aa19.08■□□□□ 0.64
SDR39U1-203ENST00000544691 OR2AG2A6NM03 316 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 B4DGG1 531 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 TP73O15350 636 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 GOT2P00505 430 aaKnown RBP19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 FTH1P19P0C7X4 201 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 CKMT2P17540 419 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 CACNG1Q06432 222 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 CKAP4Q07065 602 aaKnown RBP19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 LRP8Q14114 963 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 WHAMMP3Q1A5X7 153 aa19.07■□□□□ 0.64
SDR39U1-203ENST00000544691 GPR33Q49SQ1 333 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms