RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 OR14C36Q8NHC7 312 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 HMGB4Q8WW32 186 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 NUS1Q96E22 293 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 DTD2Q96FN9 168 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 COQ10AQ96MF6 247 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SMIM14Q96QK8 99 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 RBBP8Q99708 897 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 WRAP53Q9BUR4 548 aaKnown RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 SPATA16Q9BXB7 569 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 BTBD1Q9H0C5 482 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 PCED1AQ9H1Q7 454 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 CCDC68Q9H2F9 335 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 CENPHQ9H3R5 247 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 RHOJQ9H4E5 214 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 ASB8Q9H765 288 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 TMBIM4Q9HC24 238 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 IL26Q9NPH9 171 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 ITM2CQ9NQX7 267 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 SMOXQ9NWM0 555 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 USP36Q9P275 1121 aaKnown RBP9.45□□□□□ -0.9
YBX3-215ENST00000544504 EBF1Q9UH73 591 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 CRLS1Q9UJA2 301 aa9.45□□□□□ -0.9
YBX3-215ENST00000544504 MYLKQ15746 1914 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TRBV5-4A0A0C4DH59 114 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 AGAP14A8MT82 685 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 H3BMM5 538 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 QSOX1O00391 747 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 SPINT1O43278 529 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 RECQL5O94762 991 aaPredicted RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 RALBP11234 206 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 C6P13671 934 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ZNF7P17097 686 aaPredicted RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 KRT15P19012 456 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TEAD1P28347 426 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 SLC1A2P43004 574 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 PTGER3P43115 390 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 SLCO1A2P46721 670 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TPMTP51580 245 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 METAP1P53582 386 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 LIMK2P53671 638 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ADPRHP54922 357 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 SLC12A2P55011 1212 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ADARP55265 1226 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 SIM1P81133 766 aaPredicted RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 PEX6Q13608 980 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TMED2Q15363 201 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 COL28A1Q2UY09 1125 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 LRRC73Q5JTD7 316 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 LDLRAP1Q5SW96 308 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 UBAP2Q5T6F2 1119 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 ANO7Q6IWH7 933 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 FAM151BQ6UXP7 276 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TRIM69Q86WT6 500 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 HORMAD1Q86X24 394 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 UNC5BQ8IZJ1 945 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 RBFAQ8N0V3 343 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 GPR26Q8NDV2 337 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 DENND6BQ8NEG7 585 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 EPS8L3Q8TE67 593 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 DCAKDQ8WVC6 231 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ALKBH8Q96BT7 664 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 AP2M1Q96CW1 435 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 EID2BQ96D98 161 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 MRRFQ96E11 262 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 TSPAN17Q96FV3 270 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 VPS39Q96JC1 886 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 CABS1Q96KC9 395 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ATP6V1G3Q96LB4 118 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 VPS35Q96QK1 796 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 AGAP2Q99490 1192 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ZCCHC2Q9C0B9 1178 aaKnown RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 SUDS3Q9H7L9 328 aaPredicted RBP9.44□□□□□ -0.9
YBX3-215ENST00000544504 SMYD2Q9NRG4 433 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 GGT7Q9UJ14 662 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ITM2BQ9Y287 266 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 PCDHB1Q9Y5F3 818 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 ACTL7BQ9Y614 415 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 TENM4Q6N022 2769 aa9.44□□□□□ -0.9
YBX3-215ENST00000544504 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3DA0A087WVF3 549 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3IA0A087WXS9 549 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3EA0A087X179 549 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3KA0A087X1G2 549 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3FA6NER0 549 aaPredicted RBP9.43□□□□□ -0.9
YBX3-215ENST00000544504 CXorf49A8MYA2 514 aaPredicted RBP9.43□□□□□ -0.9
YBX3-215ENST00000544504 TBC1D3LB9A6J9 549 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 AGPSO00116 658 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 CCL22O00626 93 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 MMP20O60882 483 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 RNGTTO60942 597 aaKnown RBP9.43□□□□□ -0.9
YBX3-215ENST00000544504 FAM155BO75949 473 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 S1PR4O95977 384 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 AHSGP02765 367 aa9.43□□□□□ -0.9
YBX3-215ENST00000544504 ESR1P03372 595 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms