RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ACLYP53396 1101 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ITGA1P56199 1179 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CERS6Q6ZMG9 384 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 FAM13CQ8NE31 585 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 MRPL39Q9NYK5 338 aaKnown RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 RPTORQ8N122 1335 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 EOMESO95936 686 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 IL1R2P27930 398 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ZYG11AQ6WRX3 759 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 HEXDCQ8WVB3 486 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SLC38A2Q96QD8 506 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 AIF1LQ9BQI0 150 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GATA5Q9BWX5 397 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CA12O43570 354 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 PLIN3O60664 434 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TMEM63AO94886 807 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 RASGRP1O95267 797 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GNRH1P01148 92 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 KIR3DL1P43629 444 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GLYATQ6IB77 296 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 KIAA0408Q6ZU52 694 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 GALNT5Q7Z7M9 940 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SFRP1Q8N474 314 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ZNF607Q96SK3 696 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 PNMA8CA0A1B0GUJ8 204 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 HCRTO43612 131 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SNAP91O60641 907 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 OR4F21O95013 312 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 FGF19O95750 216 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 PRKCGP05129 697 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 TRIM32Q13049 653 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 SIX5Q8N196 739 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 ARNTL2Q8WYA1 636 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 CIB1Q99828 191 aa12.72□□□□□ -0.37
CHD4-211ENST00000544484 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
CHD4-211ENST00000544484 KELP23276 732 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 MAPKAPK2P49137 400 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 NDST2P52849 883 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 TAS2R39P59534 338 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 TIMM50Q3ZCQ8 353 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 FSTL5Q8N475 847 aaPredicted RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 KREMEN2Q8NCW0 462 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 ABCB8Q9NUT2 735 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 EIF2B4Q9UI10 523 aaKnown RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 ARL5AQ9Y689 179 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 NRP1O14786 923 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 CLDN9O95484 217 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 IL6P05231 212 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 IL10RBQ08334 325 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 ELP6Q0PNE2 266 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 TOP3AQ13472 1001 aaPredicted RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 GPR107Q5VW38 600 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 SPATA19Q7Z5L4 167 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 KRT77Q7Z794 578 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 KLK6Q92876 244 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 OR51F1A6NGY5 319 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 POP4O95707 220 aaKnown RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 PRNPP04156 253 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 PTPN2P17706 415 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 GRIA1P42261 906 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 NAPRTQ6XQN6 538 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 EXOSC8Q96B26 276 aaKnown RBP12.71□□□□□ -0.37
CHD4-211ENST00000544484 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
CHD4-211ENST00000544484 SLC31A1O15431 190 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 GMFGO60234 142 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 STX11O75558 287 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 SLC25A12O75746 678 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 MFN2O95140 757 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 IDSP22304 550 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 ITPKBP27987 946 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 ANKRD46Q86W74 232 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 PQLC1Q8N2U9 271 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 PTPN18Q99952 460 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 BRINP2Q9C0B6 783 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 ERGIC3Q9Y282 383 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 A0A1W2PRU2 124 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 CCDC189A1A4V9 331 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 G3V2T6 193 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 M0R2N6 131 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 KPNA4O00629 521 aaPredicted RBP12.71□□□□□ -0.38
CHD4-211ENST00000544484 TGDSO95455 350 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 HTR7P34969 479 aa12.71□□□□□ -0.38
CHD4-211ENST00000544484 SRP54P61011 504 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms