RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CAND1Q86VP6 1230 aaKnown RBP18.9■□□□□ 0.62
DDX55-211ENST00000544429 GALNT13Q8IUC8 556 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 GPR156Q8NFN8 814 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 SGSM3Q96HU1 749 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 C16orf45Q96MC5 204 aaPredicted RBP18.9■□□□□ 0.62
DDX55-211ENST00000544429 GSDMCQ9BYG8 508 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 IL22Q9GZX6 179 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 NCKIPSDQ9NZQ3 722 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 PLEKHM1Q9Y4G2 1056 aa18.9■□□□□ 0.62
DDX55-211ENST00000544429 COL27A1Q8IZC6 1860 aaPredicted RBP18.9■□□□□ 0.62
DDX55-211ENST00000544429 PIKFYVEQ9Y2I7 2098 aa18.89■□□□□ 0.62
DDX55-211ENST00000544429 IGLV3-16A0A075B6K0 115 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 MED19A0JLT2 244 aaPredicted RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 GRID2O43424 1007 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 NOBOXO60393 691 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 MTX2O75431 263 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 AK4P27144 223 aaPredicted RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 PMLP29590 882 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 CLCNKAP51800 687 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 TMPRSS15P98073 1019 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 ILF3Q12906 894 aaKnown RBP eCLIP18.89■□□□□ 0.616e-7■□□□□ 8.1
DDX55-211ENST00000544429 ILKQ13418 452 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 TCEA2Q15560 299 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 RNASEH2BQ5TBB1 312 aaKnown RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 MICALCLQ6ZW33 695 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 NLRP9Q7RTR0 991 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 RAB44Q7Z6P3 723 aaPredicted RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 TAF8Q7Z7C8 310 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 C11orf96Q7Z7L8 435 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 ARL10Q8N8L6 244 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 SPATA4Q8NEY3 305 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 SCG3Q8WXD2 468 aaKnown RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 ADAMTS14Q8WXS8 1223 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 ASB8Q9H765 288 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 SUDS3Q9H7L9 328 aaPredicted RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 TREX1Q9NSU2 369 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 SPATS2LQ9NUQ6 558 aaKnown RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 TAAR2Q9P1P5 351 aa18.89■□□□□ 0.61
DDX55-211ENST00000544429 APOBEC2Q9Y235 224 aaKnown RBP18.89■□□□□ 0.61
DDX55-211ENST00000544429 EME2A4GXA9 379 aaPredicted RBP18.88■□□□□ 0.61
DDX55-211ENST00000544429 SGTAO43765 313 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 CDK14O94921 469 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 MC4RP32245 332 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 B4GALNT1Q00973 533 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 PPP1R7Q15435 360 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 PCID2Q5JVF3 399 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 KLHL7Q8IXQ5 586 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 NXPE1Q8N323 547 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 RASGEF1AQ8N9B8 481 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 KYQ8NBH2 561 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 FAM46DQ8NEK8 389 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 KIFC1Q9BW19 673 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 MRM3Q9HC36 420 aaKnown RBP18.88■□□□□ 0.61
DDX55-211ENST00000544429 CHRAC1Q9NRG0 131 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 BFARQ9NZS9 450 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 SLC2A6Q9UGQ3 507 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 ZNHIT2Q9UHR6 403 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 GPR34Q9UPC5 381 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 PRKAB1Q9Y478 270 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 GPSM3Q9Y4H4 160 aa18.88■□□□□ 0.61
DDX55-211ENST00000544429 A6NCN8 305 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 DNALI1O14645 258 aaPredicted RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 TRIM16O95361 564 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 GP1BAP07359 652 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 MYF5P13349 255 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 ITGALP20701 1170 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 MGAT1P26572 445 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 FOXN2P32314 431 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 CDKN1CP49918 316 aaPredicted RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 SESN2P58004 480 aaPredicted RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 CRADDP78560 199 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 SARNPP82979 210 aaKnown RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 DR1Q01658 176 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 DHX34Q14147 1143 aaKnown RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 NR0B2Q15466 257 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 LRRTM4Q86VH4 590 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 JAMLQ86YT9 394 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 SFTPA2Q8IWL1 248 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 PPIL6Q8IXY8 311 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 PIANPQ8IYJ0 282 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 ULK4Q96C45 1275 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 SERPINB12Q96P63 405 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 TIMM29Q9BSF4 260 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 XAB2Q9HCS7 855 aaKnown RBP18.87■□□□□ 0.61
DDX55-211ENST00000544429 SYBUQ9NX95 663 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 SLC23A2Q9UGH3 650 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 DOLKQ9UPQ8 538 aa18.87■□□□□ 0.61
DDX55-211ENST00000544429 CCDC162PA2VCL2 907 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 KMOO15229 486 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 TP73O15350 636 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 AVILO75366 819 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 RFPL3O75679 317 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 TUBB4AP04350 444 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 CDK4P11802 303 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 DUSP3P51452 185 aaPredicted RBP18.86■□□□□ 0.61
DDX55-211ENST00000544429 CTSCP53634 463 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 CACNG1Q06432 222 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 HLTFQ14527 1009 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDX55-211ENST00000544429 GUSBP11Q6P575 273 aa18.86■□□□□ 0.61
DDX55-211ENST00000544429 SLC30A9Q6PML9 568 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms